Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL137244.1-201ENST00000422931 865 ntBASIC16.91■□□□□ 0.3
SNED1Q8TER0 AC010086.2-201ENST00000428616 226 ntBASIC16.91■□□□□ 0.3
SNED1Q8TER0 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 TREX1-203ENST00000456089 629 ntTSL 3 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 AC064850.1-201ENST00000413279 1398 ntBASIC16.91■□□□□ 0.3
SNED1Q8TER0 AC012617.1-204ENST00000586340 2305 ntBASIC16.91■□□□□ 0.3
SNED1Q8TER0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 GH1-203ENST00000351388 685 ntTSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 AC112250.1-201ENST00000504640 745 ntBASIC16.9■□□□□ 0.3
SNED1Q8TER0 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNED1Q8TER0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.9■□□□□ 0.3
SNED1Q8TER0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.89■□□□□ 0.3
SNED1Q8TER0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNED1Q8TER0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNED1Q8TER0 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AIG1-203ENST00000367596 559 ntTSL 2 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 MIR1307-201ENST00000408840 149 ntBASIC16.89■□□□□ 0.29
SNED1Q8TER0 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AC004923.3-201ENST00000527532 355 ntBASIC16.89■□□□□ 0.29
SNED1Q8TER0 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AC004466.2-201ENST00000614749 516 ntBASIC16.89■□□□□ 0.29
SNED1Q8TER0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SNED1Q8TER0 AC103702.1-201ENST00000548801 2630 ntBASIC16.89■□□□□ 0.29
SNED1Q8TER0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNED1Q8TER0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms