Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S1Q92572 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S1Q92572 MED15P5-201ENST00000423150 992 ntBASIC12.62□□□□□ -0.39
AP3S1Q92572 FAM58DP-201ENST00000428076 619 ntBASIC12.62□□□□□ -0.39
AP3S1Q92572 MKNK2P1-201ENST00000437526 628 ntBASIC12.62□□□□□ -0.39
AP3S1Q92572 HLA-V-204ENST00000476601 1289 ntBASIC12.62□□□□□ -0.39
AP3S1Q92572 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S1Q92572 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.62□□□□□ -0.39
AP3S1Q92572 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP3S1Q92572 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 AC022145.2-201ENST00000598203 171 ntBASIC12.62□□□□□ -0.39
AP3S1Q92572 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
AP3S1Q92572 LINC02084-201ENST00000606069 1096 ntBASIC12.62□□□□□ -0.39
AP3S1Q92572 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.62□□□□□ -0.39
AP3S1Q92572 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S1Q92572 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP3S1Q92572 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S1Q92572 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S1Q92572 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP3S1Q92572 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S1Q92572 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
AP3S1Q92572 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.61□□□□□ -0.39
AP3S1Q92572 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
AP3S1Q92572 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
AP3S1Q92572 RPL13AP25-201ENST00000484130 612 ntBASIC12.61□□□□□ -0.39
AP3S1Q92572 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.61□□□□□ -0.39
AP3S1Q92572 AC104692.2-201ENST00000603054 253 ntBASIC12.61□□□□□ -0.39
AP3S1Q92572 AL445228.2-201ENST00000605589 952 ntBASIC12.61□□□□□ -0.39
AP3S1Q92572 AC027601.4-201ENST00000611259 610 ntBASIC12.61□□□□□ -0.39
AP3S1Q92572 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 C20orf181-201ENST00000623918 480 ntBASIC12.61□□□□□ -0.39
AP3S1Q92572 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.61□□□□□ -0.39
AP3S1Q92572 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 AL021155.1-201ENST00000438808 2637 ntBASIC12.61□□□□□ -0.39
AP3S1Q92572 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
AP3S1Q92572 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.61□□□□□ -0.39
AP3S1Q92572 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
AP3S1Q92572 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.61□□□□□ -0.39
AP3S1Q92572 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms