Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 AL807761.2-201ENST00000422849 729 ntBASIC16.73■□□□□ 0.27
STAG1Q8WVM7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 AC007326.1-201ENST00000604539 458 ntBASIC16.73■□□□□ 0.27
STAG1Q8WVM7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.73■□□□□ 0.27
STAG1Q8WVM7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 AL591122.2-201ENST00000624125 1853 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 MIR33B-201ENST00000385104 96 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 PPP1R2P4-201ENST00000424051 595 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 FTH1P22-201ENST00000456305 520 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 NDUFS6P1-201ENST00000485187 316 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 MIR4706-201ENST00000582134 82 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 AC051619.9-201ENST00000623237 597 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 AL928654.5-201ENST00000624831 2501 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.72■□□□□ 0.27
STAG1Q8WVM7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.72■□□□□ 0.27
STAG1Q8WVM7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AC006480.2-201ENST00000609770 1337 ntBASIC16.71■□□□□ 0.27
STAG1Q8WVM7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AK2P2-201ENST00000439142 405 ntBASIC16.71■□□□□ 0.27
STAG1Q8WVM7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AGAP10P-201ENST00000454844 2418 ntBASIC16.71■□□□□ 0.27
STAG1Q8WVM7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
STAG1Q8WVM7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
STAG1Q8WVM7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
STAG1Q8WVM7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms