Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 FAM21FP-201ENST00000426241 1131 ntBASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 Z93015.1-201ENST00000451718 390 ntBASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 AC021723.1-201ENST00000486306 515 ntBASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 AC010328.2-201ENST00000597698 1111 ntBASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 AP000346.4-201ENST00000614827 381 ntBASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 PCDHA5-203ENST00000614258 4248 ntBASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 AC061965.1-201ENST00000560524 1465 ntBASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL3Q8IVW4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 KRT223P-202ENST00000449164 1292 ntBASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 AC022210.1-201ENST00000449856 793 ntBASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 SCARNA21-201ENST00000517026 139 ntBASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 HILS1-202ENST00000545329 423 ntBASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 AL023803.2-201ENST00000620080 638 ntBASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 COX11-210ENST00000639671 696 ntBASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 KRT8P29-201ENST00000420409 1371 ntBASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDKL3Q8IVW4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms