Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 COX5BP8-201ENST00000416911 349 ntBASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 CR383656.12-201ENST00000549567 513 ntBASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 AL137783.1-201ENST00000623494 1896 ntBASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 AC055811.4-201ENST00000624039 1754 ntBASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM53Q6P2H8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 AC132938.2-201ENST00000579188 680 ntBASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 AL022328.1-201ENST00000610050 478 ntBASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 AC012645.4-201ENST00000610691 1061 ntBASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 AL591163.1-201ENST00000641757 987 ntBASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 KRT8P24-201ENST00000560290 1559 ntBASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM53Q6P2H8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms