RNA–Protein interactions for RNA: ENST00000409549.5

LOXL3-204, Transcript of lysyl oxidase like 3, humanhuman

TSL 2 BASIC

Gene LOXL3, Length 2,897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-204ENST00000409549 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
LOXL3-204ENST00000409549 ABCC9O60706 1549 aa22.82■■□□□ 1.24
LOXL3-204ENST00000409549 CCDC180Q9P1Z9 1646 aa22.81■■□□□ 1.24
LOXL3-204ENST00000409549 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
LOXL3-204ENST00000409549 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
LOXL3-204ENST00000409549 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
LOXL3-204ENST00000409549 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
LOXL3-204ENST00000409549 HRCP23327 699 aa21.9■■□□□ 1.1
LOXL3-204ENST00000409549 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
LOXL3-204ENST00000409549 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
LOXL3-204ENST00000409549 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
LOXL3-204ENST00000409549 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
LOXL3-204ENST00000409549 RB1CC1Q8TDY2 1594 aa21.58■■□□□ 1.04
LOXL3-204ENST00000409549 NACADO15069 1562 aa21.52■■□□□ 1.04
LOXL3-204ENST00000409549 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
LOXL3-204ENST00000409549 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
LOXL3-204ENST00000409549 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
LOXL3-204ENST00000409549 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
LOXL3-204ENST00000409549 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
LOXL3-204ENST00000409549 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
LOXL3-204ENST00000409549 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
LOXL3-204ENST00000409549 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
LOXL3-204ENST00000409549 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
LOXL3-204ENST00000409549 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
LOXL3-204ENST00000409549 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
LOXL3-204ENST00000409549 RSF1Q96T23 1441 aaPredicted RBP20.69■□□□□ 0.9
LOXL3-204ENST00000409549 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
LOXL3-204ENST00000409549 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
LOXL3-204ENST00000409549 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
LOXL3-204ENST00000409549 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
LOXL3-204ENST00000409549 WIZO95785 1651 aa20.41■□□□□ 0.86
LOXL3-204ENST00000409549 CC2D2AQ9P2K1 1620 aa20.36■□□□□ 0.85
LOXL3-204ENST00000409549 BAZ1AQ9NRL2 1556 aaPredicted RBP20.34■□□□□ 0.85
LOXL3-204ENST00000409549 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
LOXL3-204ENST00000409549 NEUROD1Q13562 356 aa20.28■□□□□ 0.84
LOXL3-204ENST00000409549 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
LOXL3-204ENST00000409549 ACIN1Q9UKV3 1341 aaKnown RBP20.22■□□□□ 0.83
LOXL3-204ENST00000409549 GTF3C3Q9Y5Q9 886 aa20.17■□□□□ 0.82
LOXL3-204ENST00000409549 ATAD2BQ9ULI0 1458 aa20.15■□□□□ 0.82
LOXL3-204ENST00000409549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
LOXL3-204ENST00000409549 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
LOXL3-204ENST00000409549 BAZ1BQ9UIG0 1483 aaKnown RBP20.08■□□□□ 0.81
LOXL3-204ENST00000409549 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
LOXL3-204ENST00000409549 CCER1Q8TC90 406 aaPredicted RBP20■□□□□ 0.79
LOXL3-204ENST00000409549 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
LOXL3-204ENST00000409549 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
LOXL3-204ENST00000409549 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
LOXL3-204ENST00000409549 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
LOXL3-204ENST00000409549 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
LOXL3-204ENST00000409549 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
LOXL3-204ENST00000409549 MYT1Q01538 1121 aa19.89■□□□□ 0.77
LOXL3-204ENST00000409549 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
LOXL3-204ENST00000409549 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.77
LOXL3-204ENST00000409549 NESP48681 1621 aa19.82■□□□□ 0.76
LOXL3-204ENST00000409549 HMGXB3Q12766 1538 aa19.77■□□□□ 0.75
LOXL3-204ENST00000409549 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
LOXL3-204ENST00000409549 ERCC6Q03468 1493 aa19.58■□□□□ 0.73
LOXL3-204ENST00000409549 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
LOXL3-204ENST00000409549 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
LOXL3-204ENST00000409549 MIER1Q8N108 512 aa19.5■□□□□ 0.71
LOXL3-204ENST00000409549 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
LOXL3-204ENST00000409549 SOGA1O94964 1423 aa19.42■□□□□ 0.7
LOXL3-204ENST00000409549 CFTRP13569 1480 aa19.4■□□□□ 0.7
LOXL3-204ENST00000409549 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
LOXL3-204ENST00000409549 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
LOXL3-204ENST00000409549 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
LOXL3-204ENST00000409549 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
LOXL3-204ENST00000409549 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
LOXL3-204ENST00000409549 LAMC3Q9Y6N6 1575 aa19.33■□□□□ 0.68
LOXL3-204ENST00000409549 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
LOXL3-204ENST00000409549 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
LOXL3-204ENST00000409549 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
LOXL3-204ENST00000409549 CEP162Q5TB80 1403 aa19.17■□□□□ 0.66
LOXL3-204ENST00000409549 CUX1P39880 1505 aa19.17■□□□□ 0.66
LOXL3-204ENST00000409549 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
LOXL3-204ENST00000409549 URB2Q14146 1524 aaKnown RBP19.16■□□□□ 0.66
LOXL3-204ENST00000409549 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
LOXL3-204ENST00000409549 SUPT16HQ9Y5B9 1047 aaKnown RBP19.14■□□□□ 0.65
LOXL3-204ENST00000409549 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
LOXL3-204ENST00000409549 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.65
LOXL3-204ENST00000409549 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.64
LOXL3-204ENST00000409549 EEA1Q15075 1411 aa19.07■□□□□ 0.64
LOXL3-204ENST00000409549 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
LOXL3-204ENST00000409549 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
LOXL3-204ENST00000409549 TSHZ2Q9NRE2 1034 aa19.04■□□□□ 0.64
LOXL3-204ENST00000409549 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
LOXL3-204ENST00000409549 PRDM2Q13029 1718 aa19.03■□□□□ 0.64
LOXL3-204ENST00000409549 THOC2Q8NI27 1593 aaKnown RBP19.03■□□□□ 0.64
LOXL3-204ENST00000409549 FBLN2P98095 1184 aa19.03■□□□□ 0.64
LOXL3-204ENST00000409549 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
LOXL3-204ENST00000409549 ANP32EQ9BTT0 268 aa18.99■□□□□ 0.63
LOXL3-204ENST00000409549 BCL11AQ9H165 835 aa18.99■□□□□ 0.63
LOXL3-204ENST00000409549 POLA1P09884 1462 aaPredicted RBP18.96■□□□□ 0.63
LOXL3-204ENST00000409549 GOLGA3Q08378 1498 aa18.96■□□□□ 0.63
LOXL3-204ENST00000409549 TNIKQ9UKE5 1360 aa18.96■□□□□ 0.63
LOXL3-204ENST00000409549 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.63
LOXL3-204ENST00000409549 RAPGEF2Q9Y4G8 1499 aa18.96■□□□□ 0.63
LOXL3-204ENST00000409549 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
LOXL3-204ENST00000409549 BCANQ96GW7 911 aa18.95■□□□□ 0.62
LOXL3-204ENST00000409549 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms