Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH4P55283 LINC01230-201ENST00000625222 3017 ntBASIC14.54□□□□□ -0.08
CDH4P55283 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CDH4P55283 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH4P55283 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.54□□□□□ -0.08
CDH4P55283 EEF1DP6-201ENST00000449232 372 ntBASIC14.54□□□□□ -0.08
CDH4P55283 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH4P55283 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH4P55283 AC019193.1-201ENST00000506678 823 ntBASIC14.54□□□□□ -0.08
CDH4P55283 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH4P55283 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH4P55283 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.54□□□□□ -0.08
CDH4P55283 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH4P55283 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH4P55283 RN7SL455P-201ENST00000580629 282 ntBASIC14.54□□□□□ -0.08
CDH4P55283 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.54□□□□□ -0.08
CDH4P55283 AC051619.9-201ENST00000623237 597 ntBASIC14.54□□□□□ -0.08
CDH4P55283 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH4P55283 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 AL139158.3-201ENST00000641212 1562 ntBASIC14.54□□□□□ -0.08
CDH4P55283 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH4P55283 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 AL591122.2-201ENST00000624125 1853 ntBASIC14.54□□□□□ -0.08
CDH4P55283 AC138969.2-201ENST00000532739 9932 ntBASIC14.54□□□□□ -0.08
CDH4P55283 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH4P55283 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH4P55283 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH4P55283 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH4P55283 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH4P55283 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH4P55283 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH4P55283 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH4P55283 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH4P55283 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH4P55283 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH4P55283 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH4P55283 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDH4P55283 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH4P55283 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH4P55283 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH4P55283 RPL18AP8-201ENST00000486071 528 ntBASIC14.53□□□□□ -0.08
CDH4P55283 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
CDH4P55283 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH4P55283 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH4P55283 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH4P55283 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CDH4P55283 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH4P55283 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH4P55283 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH4P55283 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH4P55283 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH4P55283 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH4P55283 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.52□□□□□ -0.08
CDH4P55283 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH4P55283 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CDH4P55283 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH4P55283 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CDH4P55283 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH4P55283 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH4P55283 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CDH4P55283 KRT8P24-201ENST00000560290 1559 ntBASIC14.52□□□□□ -0.08
CDH4P55283 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms