Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL022334.2-201ENST00000610000 484 ntBASIC14.69□□□□□ -0.06
ERCC2P18074 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC2P18074 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC2P18074 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC2P18074 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC2P18074 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ERCC2P18074 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC2P18074 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC2P18074 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.69□□□□□ -0.06
ERCC2P18074 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC2P18074 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC2P18074 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
ERCC2P18074 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC2P18074 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC2P18074 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC2P18074 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC2P18074 BRD7P5-201ENST00000299197 1822 ntBASIC14.69□□□□□ -0.06
ERCC2P18074 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.69□□□□□ -0.06
ERCC2P18074 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ERCC2P18074 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ERCC2P18074 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.68□□□□□ -0.06
ERCC2P18074 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.68□□□□□ -0.06
ERCC2P18074 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
ERCC2P18074 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ERCC2P18074 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.68□□□□□ -0.06
ERCC2P18074 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.68□□□□□ -0.06
ERCC2P18074 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 RNA5SP359-201ENST00000364838 113 ntBASIC14.68□□□□□ -0.06
ERCC2P18074 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.68□□□□□ -0.06
ERCC2P18074 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.68□□□□□ -0.06
ERCC2P18074 RN7SL530P-201ENST00000485097 298 ntBASIC14.68□□□□□ -0.06
ERCC2P18074 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.68□□□□□ -0.06
ERCC2P18074 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 MIR6799-201ENST00000620297 69 ntBASIC14.68□□□□□ -0.06
ERCC2P18074 AC244452.3-201ENST00000636814 210 ntBASIC14.68□□□□□ -0.06
ERCC2P18074 NAP1L6-202ENST00000641404 1222 ntBASIC14.68□□□□□ -0.06
ERCC2P18074 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ERCC2P18074 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ERCC2P18074 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ERCC2P18074 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.68□□□□□ -0.06
ERCC2P18074 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 AL157791.1-201ENST00000553667 1699 ntBASIC14.68□□□□□ -0.06
ERCC2P18074 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC2P18074 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.67□□□□□ -0.06
ERCC2P18074 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
ERCC2P18074 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.67□□□□□ -0.06
ERCC2P18074 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.67□□□□□ -0.06
ERCC2P18074 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 AC130686.1-201ENST00000622936 2466 ntBASIC14.67□□□□□ -0.06
ERCC2P18074 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ERCC2P18074 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ERCC2P18074 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.67□□□□□ -0.06
ERCC2P18074 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ERCC2P18074 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 RPS9P1-201ENST00000419943 583 ntBASIC14.67□□□□□ -0.06
ERCC2P18074 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.67□□□□□ -0.06
ERCC2P18074 BX284668.4-201ENST00000453917 508 ntBASIC14.67□□□□□ -0.06
ERCC2P18074 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.67□□□□□ -0.06
ERCC2P18074 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.67□□□□□ -0.06
ERCC2P18074 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.67□□□□□ -0.06
ERCC2P18074 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.67□□□□□ -0.06
ERCC2P18074 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.67□□□□□ -0.06
ERCC2P18074 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ERCC2P18074 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ERCC2P18074 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms