Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CCDC130P13994 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 TBC1D3J-201ENST00000620719 1426 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 AL157996.1-201ENST00000624684 2299 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC130P13994 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 RPL8P2-201ENST00000430538 502 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC130P13994 AC026320.2-201ENST00000434379 478 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC130P13994 UPF3AP2-201ENST00000457924 1132 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 AC008723.1-201ENST00000506922 207 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 AC134698.3-201ENST00000523880 214 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC130P13994 KRT8P1-201ENST00000557533 1207 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC130P13994 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC130P13994 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
CCDC130P13994 AL133499.1-201ENST00000596207 608 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC130P13994 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC130P13994 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC130P13994 AC079336.7-201ENST00000623428 1078 ntBASIC15.12■□□□□ 0.01
CCDC130P13994 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC130P13994 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC130P13994 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC130P13994 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC130P13994 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC130P13994 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC130P13994 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC130P13994 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC130P13994 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC130P13994 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC130P13994 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC130P13994 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 AC090643.2-201ENST00000623442 2029 ntBASIC15.11■□□□□ 0.01
CCDC130P13994 AL928921.2-201ENST00000641325 2442 ntBASIC15.11■□□□□ 0.01
CCDC130P13994 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC130P13994 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC130P13994 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC130P13994 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC130P13994 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC130P13994 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 RPSAP15-201ENST00000448168 861 ntBASIC15.11■□□□□ 0.01
CCDC130P13994 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CCDC130P13994 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC130P13994 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC130P13994 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCDC130P13994 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC130P13994 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC130P13994 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC130P13994 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC130P13994 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC130P13994 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC130P13994 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC130P13994 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC130P13994 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC130P13994 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC130P13994 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.1■□□□□ 0.01
CCDC130P13994 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCDC130P13994 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms