Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 PCDHB17P-202ENST00000623466 3066 ntBASIC12.8□□□□□ -0.36
APOA1P02647 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.79□□□□□ -0.36
APOA1P02647 DDX12P-201ENST00000432996 2947 ntBASIC12.79□□□□□ -0.36
APOA1P02647 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
APOA1P02647 STX16-202ENST00000355957 4897 ntTSL 2 BASIC12.79□□□□□ -0.36
APOA1P02647 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.79□□□□□ -0.36
APOA1P02647 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.79□□□□□ -0.36
APOA1P02647 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 AC004870.1-201ENST00000315132 882 ntBASIC12.79□□□□□ -0.36
APOA1P02647 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.79□□□□□ -0.36
APOA1P02647 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.79□□□□□ -0.36
APOA1P02647 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.79□□□□□ -0.36
APOA1P02647 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
APOA1P02647 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.79□□□□□ -0.36
APOA1P02647 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.79□□□□□ -0.36
APOA1P02647 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.79□□□□□ -0.36
APOA1P02647 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.79□□□□□ -0.36
APOA1P02647 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.79□□□□□ -0.36
APOA1P02647 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.79□□□□□ -0.36
APOA1P02647 AL445250.1-201ENST00000641671 2259 ntBASIC12.79□□□□□ -0.36
APOA1P02647 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.79□□□□□ -0.36
APOA1P02647 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
APOA1P02647 AL136172.1-201ENST00000598590 1394 ntBASIC12.79□□□□□ -0.36
APOA1P02647 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
APOA1P02647 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
APOA1P02647 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOA1P02647 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.78□□□□□ -0.36
APOA1P02647 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APOA1P02647 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APOA1P02647 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
APOA1P02647 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 AL080243.2-201ENST00000418783 582 ntBASIC12.78□□□□□ -0.36
APOA1P02647 TLE1P1-201ENST00000422965 589 ntBASIC12.78□□□□□ -0.36
APOA1P02647 AL353779.1-201ENST00000434793 351 ntBASIC12.78□□□□□ -0.36
APOA1P02647 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
APOA1P02647 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.78□□□□□ -0.36
APOA1P02647 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
APOA1P02647 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.78□□□□□ -0.36
APOA1P02647 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APOA1P02647 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.78□□□□□ -0.36
APOA1P02647 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms