RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
PBX1-203ENST00000420696 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
PBX1-203ENST00000420696 CCER1Q8TC90 406 aaPredicted RBP18.57■□□□□ 0.56
PBX1-203ENST00000420696 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
PBX1-203ENST00000420696 ERICH6Q7L0X2 663 aa18.46■□□□□ 0.55
PBX1-203ENST00000420696 APLP2Q06481 763 aa18.4■□□□□ 0.54
PBX1-203ENST00000420696 NISCHQ9Y2I1 1504 aa18.18■□□□□ 0.5
PBX1-203ENST00000420696 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
PBX1-203ENST00000420696 MYT1Q01538 1121 aa18.07■□□□□ 0.48
PBX1-203ENST00000420696 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
PBX1-203ENST00000420696 NEFLP07196 543 aa17.85■□□□□ 0.45
PBX1-203ENST00000420696 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
PBX1-203ENST00000420696 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
PBX1-203ENST00000420696 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
PBX1-203ENST00000420696 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.42
PBX1-203ENST00000420696 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
PBX1-203ENST00000420696 ATP1B4Q9UN42 357 aaPredicted RBP17.3■□□□□ 0.36
PBX1-203ENST00000420696 TTBK1Q5TCY1 1321 aaPredicted RBP17.26■□□□□ 0.35
PBX1-203ENST00000420696 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
PBX1-203ENST00000420696 RTL5Q5HYW3 569 aaPredicted RBP17.12■□□□□ 0.33
PBX1-203ENST00000420696 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
PBX1-203ENST00000420696 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
PBX1-203ENST00000420696 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
PBX1-203ENST00000420696 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
PBX1-203ENST00000420696 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
PBX1-203ENST00000420696 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
PBX1-203ENST00000420696 POLR3GLQ9BT43 218 aa16.87■□□□□ 0.29
PBX1-203ENST00000420696 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
PBX1-203ENST00000420696 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
PBX1-203ENST00000420696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
PBX1-203ENST00000420696 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
PBX1-203ENST00000420696 NEFMP07197 916 aa16.5■□□□□ 0.23
PBX1-203ENST00000420696 CNGB1Q14028 1251 aaPredicted RBP16.48■□□□□ 0.23
PBX1-203ENST00000420696 ITGAEP38570 1179 aa16.47■□□□□ 0.23
PBX1-203ENST00000420696 ANP32BQ92688 251 aaKnown RBP16.47■□□□□ 0.23
PBX1-203ENST00000420696 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
PBX1-203ENST00000420696 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
PBX1-203ENST00000420696 GLIPR1L2Q4G1C9 344 aa16.4■□□□□ 0.22
PBX1-203ENST00000420696 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
PBX1-203ENST00000420696 HRCP23327 699 aa16.37■□□□□ 0.21
PBX1-203ENST00000420696 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
PBX1-203ENST00000420696 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
PBX1-203ENST00000420696 CDK11BP21127 795 aaKnown RBP16.28■□□□□ 0.2
PBX1-203ENST00000420696 ANP32AP39687 249 aaKnown RBP16.22■□□□□ 0.19
PBX1-203ENST00000420696 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
PBX1-203ENST00000420696 ANP32CO43423 234 aa16.17■□□□□ 0.18
PBX1-203ENST00000420696 HSP90AA1P07900 732 aaKnown RBP16.17■□□□□ 0.18
PBX1-203ENST00000420696 TRIM52Q96A61 297 aa16.16■□□□□ 0.18
PBX1-203ENST00000420696 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
PBX1-203ENST00000420696 UPF2Q9HAU5 1272 aaKnown RBP16.13■□□□□ 0.17
PBX1-203ENST00000420696 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
PBX1-203ENST00000420696 BCL11AQ9H165 835 aa16.09■□□□□ 0.17
PBX1-203ENST00000420696 BCANQ96GW7 911 aa16.06■□□□□ 0.16
PBX1-203ENST00000420696 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.15
PBX1-203ENST00000420696 ZNF326Q5BKZ1 582 aaKnown RBP15.99■□□□□ 0.15
PBX1-203ENST00000420696 ESF1Q9H501 851 aaKnown RBP15.92■□□□□ 0.14
PBX1-203ENST00000420696 TNNT2P45379 298 aaPredicted RBP15.9■□□□□ 0.14
PBX1-203ENST00000420696 NEUROD1Q13562 356 aa15.89■□□□□ 0.13
PBX1-203ENST00000420696 NPM2Q86SE8 214 aaKnown RBP15.87■□□□□ 0.13
PBX1-203ENST00000420696 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.86■□□□□ 0.13
PBX1-203ENST00000420696 CCDC180Q9P1Z9 1646 aa15.85■□□□□ 0.13
PBX1-203ENST00000420696 ANP32EQ9BTT0 268 aa15.84■□□□□ 0.13
PBX1-203ENST00000420696 NCLP19338 710 aaKnown RBP15.78■□□□□ 0.12
PBX1-203ENST00000420696 GTF3C3Q9Y5Q9 886 aa15.78■□□□□ 0.12
PBX1-203ENST00000420696 ZRSR1Q15695 479 aaKnown RBP15.73■□□□□ 0.11
PBX1-203ENST00000420696 STAG3Q9UJ98 1225 aa15.73■□□□□ 0.11
PBX1-203ENST00000420696 MYH16Q9H6N6 1097 aa15.72■□□□□ 0.11
PBX1-203ENST00000420696 GOLGA6L22H0YM25 854 aa15.7■□□□□ 0.1
PBX1-203ENST00000420696 TRIM44Q96DX7 344 aaPredicted RBP15.69■□□□□ 0.1
PBX1-203ENST00000420696 BECN1Q14457 450 aa15.6■□□□□ 0.09
PBX1-203ENST00000420696 NRDCO43847 1150 aa15.6■□□□□ 0.09
PBX1-203ENST00000420696 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
PBX1-203ENST00000420696 FBLN2P98095 1184 aa15.57■□□□□ 0.08
PBX1-203ENST00000420696 LOC105371045A0A1W2PR82 267 aa15.55■□□□□ 0.08
PBX1-203ENST00000420696 PTMAP06454 111 aaKnown RBP15.55■□□□□ 0.08
PBX1-203ENST00000420696 CHGAP10645 457 aaKnown RBP15.54■□□□□ 0.08
PBX1-203ENST00000420696 L1TD1Q5T7N2 865 aaKnown RBP15.54■□□□□ 0.08
PBX1-203ENST00000420696 GOLGA6L6A8MZA4 724 aa15.53■□□□□ 0.08
PBX1-203ENST00000420696 WDR43Q15061 677 aaKnown RBP eCLIP15.53■□□□□ 0.08
PBX1-203ENST00000420696 DDRGK1Q96HY6 314 aa15.52■□□□□ 0.07
PBX1-203ENST00000420696 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
PBX1-203ENST00000420696 ERICH6BQ5W0A0 696 aa15.5■□□□□ 0.07
PBX1-203ENST00000420696 ARXQ96QS3 562 aa15.49■□□□□ 0.07
PBX1-203ENST00000420696 A0A0G2JS52 829 aa15.49■□□□□ 0.07
PBX1-203ENST00000420696 ABCC9O60706 1549 aa15.49■□□□□ 0.07
PBX1-203ENST00000420696 DNTTIP2Q5QJE6 756 aaKnown RBP15.49■□□□□ 0.07
PBX1-203ENST00000420696 FKBP8Q14318 412 aa15.48■□□□□ 0.07
PBX1-203ENST00000420696 TMC1Q8TDI8 760 aa15.48■□□□□ 0.07
PBX1-203ENST00000420696 HNRNPUQ00839 825 aaKnown RBP eCLIP15.47■□□□□ 0.07
PBX1-203ENST00000420696 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
PBX1-203ENST00000420696 CASC1Q6TDU7 716 aa15.45■□□□□ 0.06
PBX1-203ENST00000420696 ZNF777Q9ULD5 760 aaPredicted RBP15.45■□□□□ 0.06
PBX1-203ENST00000420696 TONSLQ96HA7 1378 aa15.43■□□□□ 0.06
PBX1-203ENST00000420696 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
PBX1-203ENST00000420696 NBR1Q14596 966 aa15.39■□□□□ 0.05
PBX1-203ENST00000420696 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
PBX1-203ENST00000420696 TULP1O00294 542 aaPredicted RBP15.36■□□□□ 0.05
PBX1-203ENST00000420696 CHMP4BQ9H444 224 aaKnown RBP15.35■□□□□ 0.05
PBX1-203ENST00000420696 CHAF1AQ13111 956 aaPredicted RBP15.34■□□□□ 0.05
PBX1-203ENST00000420696 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms