RNA–Protein interactions for RNA: ENST00000219400.7

CMC2-201, Transcript of C-X9-C motif containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC2, Length 10,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-201ENST00000219400 PELP1Q8IZL8 1130 aaKnown RBP19.63■□□□□ 0.73
CMC2-201ENST00000219400 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
CMC2-201ENST00000219400 ERICH6Q7L0X2 663 aa18.76■□□□□ 0.59
CMC2-201ENST00000219400 CCER1Q8TC90 406 aaPredicted RBP18.66■□□□□ 0.58
CMC2-201ENST00000219400 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
CMC2-201ENST00000219400 APLP2Q06481 763 aa18.36■□□□□ 0.53
CMC2-201ENST00000219400 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
CMC2-201ENST00000219400 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
CMC2-201ENST00000219400 MYT1Q01538 1121 aa18.09■□□□□ 0.49
CMC2-201ENST00000219400 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
CMC2-201ENST00000219400 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
CMC2-201ENST00000219400 NEFLP07196 543 aa17.94■□□□□ 0.46
CMC2-201ENST00000219400 DAXXQ9UER7 740 aaPredicted RBP17.93■□□□□ 0.46
CMC2-201ENST00000219400 TTBK1Q5TCY1 1321 aaPredicted RBP17.66■□□□□ 0.42
CMC2-201ENST00000219400 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
CMC2-201ENST00000219400 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
CMC2-201ENST00000219400 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
CMC2-201ENST00000219400 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
CMC2-201ENST00000219400 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
CMC2-201ENST00000219400 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
CMC2-201ENST00000219400 RTL5Q5HYW3 569 aaPredicted RBP17.3■□□□□ 0.36
CMC2-201ENST00000219400 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
CMC2-201ENST00000219400 MYT1LQ9UL68 1186 aa17.15■□□□□ 0.34
CMC2-201ENST00000219400 POLR3GLQ9BT43 218 aa17.08■□□□□ 0.33
CMC2-201ENST00000219400 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
CMC2-201ENST00000219400 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
CMC2-201ENST00000219400 UBTFP17480 764 aaKnown RBP16.97■□□□□ 0.31
CMC2-201ENST00000219400 ZBTB47Q9UFB7 747 aaPredicted RBP16.92■□□□□ 0.3
CMC2-201ENST00000219400 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
CMC2-201ENST00000219400 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
CMC2-201ENST00000219400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.27
CMC2-201ENST00000219400 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.27
CMC2-201ENST00000219400 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
CMC2-201ENST00000219400 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
CMC2-201ENST00000219400 ANP32BQ92688 251 aaKnown RBP16.66■□□□□ 0.26
CMC2-201ENST00000219400 GLIPR1L2Q4G1C9 344 aa16.62■□□□□ 0.25
CMC2-201ENST00000219400 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
CMC2-201ENST00000219400 ITGAEP38570 1179 aa16.58■□□□□ 0.25
CMC2-201ENST00000219400 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
CMC2-201ENST00000219400 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.24
CMC2-201ENST00000219400 CDK11AQ9UQ88 783 aaPredicted RBP16.52■□□□□ 0.24
CMC2-201ENST00000219400 NEFMP07197 916 aa16.52■□□□□ 0.23
CMC2-201ENST00000219400 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
CMC2-201ENST00000219400 HSP90AA1P07900 732 aaKnown RBP16.42■□□□□ 0.22
CMC2-201ENST00000219400 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
CMC2-201ENST00000219400 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
CMC2-201ENST00000219400 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
CMC2-201ENST00000219400 BCANQ96GW7 911 aa16.28■□□□□ 0.2
CMC2-201ENST00000219400 HRCP23327 699 aa16.27■□□□□ 0.19
CMC2-201ENST00000219400 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
CMC2-201ENST00000219400 ANP32CO43423 234 aa16.16■□□□□ 0.18
CMC2-201ENST00000219400 DIEXFQ68CQ4 756 aaKnown RBP16.16■□□□□ 0.18
CMC2-201ENST00000219400 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
CMC2-201ENST00000219400 TRIM52Q96A61 297 aa16.14■□□□□ 0.18
CMC2-201ENST00000219400 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
CMC2-201ENST00000219400 FAM50AQ14320 339 aaKnown RBP16.1■□□□□ 0.17
CMC2-201ENST00000219400 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
CMC2-201ENST00000219400 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
CMC2-201ENST00000219400 ARXQ96QS3 562 aa15.95■□□□□ 0.14
CMC2-201ENST00000219400 ESF1Q9H501 851 aaKnown RBP15.93■□□□□ 0.14
CMC2-201ENST00000219400 ZRSR1Q15695 479 aaKnown RBP15.9■□□□□ 0.14
CMC2-201ENST00000219400 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
CMC2-201ENST00000219400 TRIM44Q96DX7 344 aaPredicted RBP15.87■□□□□ 0.13
CMC2-201ENST00000219400 GTF3C3Q9Y5Q9 886 aa15.86■□□□□ 0.13
CMC2-201ENST00000219400 TULP1O00294 542 aaPredicted RBP15.85■□□□□ 0.13
CMC2-201ENST00000219400 NCLP19338 710 aaKnown RBP15.84■□□□□ 0.13
CMC2-201ENST00000219400 A0A0G2JS52 829 aa15.82■□□□□ 0.12
CMC2-201ENST00000219400 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.81■□□□□ 0.12
CMC2-201ENST00000219400 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
CMC2-201ENST00000219400 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
CMC2-201ENST00000219400 NBR1Q14596 966 aa15.77■□□□□ 0.12
CMC2-201ENST00000219400 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
CMC2-201ENST00000219400 GOLGA6L6A8MZA4 724 aa15.74■□□□□ 0.11
CMC2-201ENST00000219400 GOLGA6L22H0YM25 854 aa15.73■□□□□ 0.11
CMC2-201ENST00000219400 PTMAP06454 111 aaKnown RBP15.72■□□□□ 0.11
CMC2-201ENST00000219400 DNTTIP2Q5QJE6 756 aaKnown RBP15.72■□□□□ 0.11
CMC2-201ENST00000219400 ANP32EQ9BTT0 268 aa15.7■□□□□ 0.1
CMC2-201ENST00000219400 CLSTN1O94985 981 aa15.67■□□□□ 0.1
CMC2-201ENST00000219400 BECN1Q14457 450 aa15.67■□□□□ 0.1
CMC2-201ENST00000219400 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
CMC2-201ENST00000219400 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
CMC2-201ENST00000219400 FBLN2P98095 1184 aa15.64■□□□□ 0.09
CMC2-201ENST00000219400 NRDCO43847 1150 aa15.59■□□□□ 0.09
CMC2-201ENST00000219400 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
CMC2-201ENST00000219400 PRM3Q9NNZ6 103 aa15.56■□□□□ 0.08
CMC2-201ENST00000219400 L1TD1Q5T7N2 865 aaKnown RBP15.55■□□□□ 0.08
CMC2-201ENST00000219400 CHAF1AQ13111 956 aaPredicted RBP15.55■□□□□ 0.08
CMC2-201ENST00000219400 WDR43Q15061 677 aaKnown RBP eCLIP15.55■□□□□ 0.08
CMC2-201ENST00000219400 NPHP1O15259 732 aa15.55■□□□□ 0.08
CMC2-201ENST00000219400 DDRGK1Q96HY6 314 aa15.54■□□□□ 0.08
CMC2-201ENST00000219400 NOC3LQ8WTT2 800 aaKnown RBP15.52■□□□□ 0.07
CMC2-201ENST00000219400 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
CMC2-201ENST00000219400 FKBP8Q14318 412 aa15.51■□□□□ 0.07
CMC2-201ENST00000219400 TPRNQ4KMQ1 711 aa15.49■□□□□ 0.07
CMC2-201ENST00000219400 KIAA2012Q0VF49 1180 aa15.49■□□□□ 0.07
CMC2-201ENST00000219400 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
CMC2-201ENST00000219400 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
CMC2-201ENST00000219400 ZBTB7CA1YPR0 619 aa15.47■□□□□ 0.07
CMC2-201ENST00000219400 AMER1Q5JTC6 1135 aaPredicted RBP15.46■□□□□ 0.07
CMC2-201ENST00000219400 HNRNPUQ00839 825 aaKnown RBP eCLIP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms