RNA–Protein interactions for RNA: ENST00000254037.6

ZCCHC9-201, Transcript of zinc finger CCHC-type containing 9, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZCCHC9, Length 4,606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-201ENST00000254037 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
ZCCHC9-201ENST00000254037 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
ZCCHC9-201ENST00000254037 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
ZCCHC9-201ENST00000254037 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
ZCCHC9-201ENST00000254037 EHMT2Q96KQ7 1210 aa18.97■□□□□ 0.63
ZCCHC9-201ENST00000254037 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
ZCCHC9-201ENST00000254037 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
ZCCHC9-201ENST00000254037 ERICH6Q7L0X2 663 aa18.64■□□□□ 0.57
ZCCHC9-201ENST00000254037 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
ZCCHC9-201ENST00000254037 MYT1Q01538 1121 aa18.53■□□□□ 0.56
ZCCHC9-201ENST00000254037 APLP2Q06481 763 aa18.43■□□□□ 0.54
ZCCHC9-201ENST00000254037 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
ZCCHC9-201ENST00000254037 TTBK1Q5TCY1 1321 aaPredicted RBP18.42■□□□□ 0.54
ZCCHC9-201ENST00000254037 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
ZCCHC9-201ENST00000254037 ZEB1P37275 1124 aaPredicted RBP18.24■□□□□ 0.51
ZCCHC9-201ENST00000254037 YTHDC1Q96MU7 727 aaKnown RBP18.2■□□□□ 0.5
ZCCHC9-201ENST00000254037 NEFLP07196 543 aa18.1■□□□□ 0.49
ZCCHC9-201ENST00000254037 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
ZCCHC9-201ENST00000254037 HRCP23327 699 aa17.76■□□□□ 0.43
ZCCHC9-201ENST00000254037 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
ZCCHC9-201ENST00000254037 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
ZCCHC9-201ENST00000254037 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
ZCCHC9-201ENST00000254037 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
ZCCHC9-201ENST00000254037 UBTFP17480 764 aaKnown RBP17.6■□□□□ 0.41
ZCCHC9-201ENST00000254037 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
ZCCHC9-201ENST00000254037 RTL5Q5HYW3 569 aaPredicted RBP17.43■□□□□ 0.38
ZCCHC9-201ENST00000254037 CNGB1Q14028 1251 aaPredicted RBP17.33■□□□□ 0.37
ZCCHC9-201ENST00000254037 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.37
ZCCHC9-201ENST00000254037 POLR3GLQ9BT43 218 aa17.33■□□□□ 0.37
ZCCHC9-201ENST00000254037 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
ZCCHC9-201ENST00000254037 ITGAEP38570 1179 aa17.28■□□□□ 0.36
ZCCHC9-201ENST00000254037 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
ZCCHC9-201ENST00000254037 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
ZCCHC9-201ENST00000254037 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
ZCCHC9-201ENST00000254037 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
ZCCHC9-201ENST00000254037 BCANQ96GW7 911 aa17.18■□□□□ 0.34
ZCCHC9-201ENST00000254037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
ZCCHC9-201ENST00000254037 CLSPNQ9HAW4 1339 aa17.15■□□□□ 0.34
ZCCHC9-201ENST00000254037 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
ZCCHC9-201ENST00000254037 EIF5BO60841 1220 aaKnown RBP16.94■□□□□ 0.3
ZCCHC9-201ENST00000254037 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
ZCCHC9-201ENST00000254037 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
ZCCHC9-201ENST00000254037 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
ZCCHC9-201ENST00000254037 ABCC9O60706 1549 aa16.78■□□□□ 0.28
ZCCHC9-201ENST00000254037 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
ZCCHC9-201ENST00000254037 ANP32CO43423 234 aa16.72■□□□□ 0.27
ZCCHC9-201ENST00000254037 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
ZCCHC9-201ENST00000254037 ANP32AP39687 249 aaKnown RBP16.69■□□□□ 0.26
ZCCHC9-201ENST00000254037 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
ZCCHC9-201ENST00000254037 BCL11AQ9H165 835 aa16.63■□□□□ 0.25
ZCCHC9-201ENST00000254037 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
ZCCHC9-201ENST00000254037 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
ZCCHC9-201ENST00000254037 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
ZCCHC9-201ENST00000254037 FKBP8Q14318 412 aa16.56■□□□□ 0.24
ZCCHC9-201ENST00000254037 GLIPR1L2Q4G1C9 344 aa16.56■□□□□ 0.24
ZCCHC9-201ENST00000254037 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
ZCCHC9-201ENST00000254037 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
ZCCHC9-201ENST00000254037 NBR1Q14596 966 aa16.49■□□□□ 0.23
ZCCHC9-201ENST00000254037 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
ZCCHC9-201ENST00000254037 CCDC180Q9P1Z9 1646 aa16.46■□□□□ 0.23
ZCCHC9-201ENST00000254037 ANP32BQ92688 251 aaKnown RBP16.43■□□□□ 0.22
ZCCHC9-201ENST00000254037 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
ZCCHC9-201ENST00000254037 ARXQ96QS3 562 aa16.37■□□□□ 0.21
ZCCHC9-201ENST00000254037 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
ZCCHC9-201ENST00000254037 HSP90AA1P07900 732 aaKnown RBP16.34■□□□□ 0.21
ZCCHC9-201ENST00000254037 HNRNPUQ00839 825 aaKnown RBP eCLIP16.33■□□□□ 0.2
ZCCHC9-201ENST00000254037 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
ZCCHC9-201ENST00000254037 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
ZCCHC9-201ENST00000254037 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
ZCCHC9-201ENST00000254037 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
ZCCHC9-201ENST00000254037 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
ZCCHC9-201ENST00000254037 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
ZCCHC9-201ENST00000254037 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
ZCCHC9-201ENST00000254037 SALL2Q9Y467 1007 aaPredicted RBP16.21■□□□□ 0.19
ZCCHC9-201ENST00000254037 NEFMP07197 916 aa16.18■□□□□ 0.18
ZCCHC9-201ENST00000254037 IRX6P78412 446 aaPredicted RBP16.17■□□□□ 0.18
ZCCHC9-201ENST00000254037 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
ZCCHC9-201ENST00000254037 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
ZCCHC9-201ENST00000254037 MIER1Q8N108 512 aa16.13■□□□□ 0.17
ZCCHC9-201ENST00000254037 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
ZCCHC9-201ENST00000254037 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
ZCCHC9-201ENST00000254037 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
ZCCHC9-201ENST00000254037 TMC1Q8TDI8 760 aa16.01■□□□□ 0.15
ZCCHC9-201ENST00000254037 TRIM44Q96DX7 344 aaPredicted RBP16.01■□□□□ 0.15
ZCCHC9-201ENST00000254037 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
ZCCHC9-201ENST00000254037 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
ZCCHC9-201ENST00000254037 MRS2Q9HD23 443 aa15.99■□□□□ 0.15
ZCCHC9-201ENST00000254037 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
ZCCHC9-201ENST00000254037 TNNT2P45379 298 aaPredicted RBP15.95■□□□□ 0.14
ZCCHC9-201ENST00000254037 ERICH6BQ5W0A0 696 aa15.95■□□□□ 0.14
ZCCHC9-201ENST00000254037 HIRIP3Q9BW71 556 aaPredicted RBP15.93■□□□□ 0.14
ZCCHC9-201ENST00000254037 NAP1L5Q96NT1 182 aaPredicted RBP15.89■□□□□ 0.13
ZCCHC9-201ENST00000254037 ZNF777Q9ULD5 760 aaPredicted RBP15.88■□□□□ 0.13
ZCCHC9-201ENST00000254037 NACADO15069 1562 aa15.87■□□□□ 0.13
ZCCHC9-201ENST00000254037 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
ZCCHC9-201ENST00000254037 DDRGK1Q96HY6 314 aa15.87■□□□□ 0.13
ZCCHC9-201ENST00000254037 LAS1LQ9Y4W2 734 aaKnown RBP15.86■□□□□ 0.13
ZCCHC9-201ENST00000254037 BECN1Q14457 450 aa15.85■□□□□ 0.13
ZCCHC9-201ENST00000254037 SENP3-EIF4A1A0A087X0R7 540 aa15.83■□□□□ 0.12
ZCCHC9-201ENST00000254037 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms