Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC15.33■□□□□ 0.04
CTAGE9A4FU28 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC15.33■□□□□ 0.04
CTAGE9A4FU28 PCDHB19P-202ENST00000625133 2914 ntBASIC15.33■□□□□ 0.04
CTAGE9A4FU28 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 MSNP1-201ENST00000511640 1732 ntBASIC15.32■□□□□ 0.04
CTAGE9A4FU28 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 KRT18P25-201ENST00000508931 1278 ntBASIC15.32■□□□□ 0.04
CTAGE9A4FU28 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.32■□□□□ 0.04
CTAGE9A4FU28 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 GHET1-201ENST00000627071 1906 ntBASIC15.31■□□□□ 0.04
CTAGE9A4FU28 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 MEP1AP4-201ENST00000423244 1087 ntBASIC15.31■□□□□ 0.04
CTAGE9A4FU28 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 AL442647.2-201ENST00000429864 857 ntBASIC15.31■□□□□ 0.04
CTAGE9A4FU28 AC245100.3-201ENST00000441281 285 ntBASIC15.31■□□□□ 0.04
CTAGE9A4FU28 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 AC138466.3-201ENST00000619983 221 ntBASIC15.31■□□□□ 0.04
CTAGE9A4FU28 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 LINC01165-201ENST00000445190 1623 ntBASIC15.31■□□□□ 0.04
CTAGE9A4FU28 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTAGE9A4FU28 VENTXP1-201ENST00000569334 2716 ntBASIC15.3■□□□□ 0.04
CTAGE9A4FU28 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms