Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 MYADML-201ENST00000474610 2147 ntBASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC027601.5-201ENST00000624065 2482 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC152010.1-201ENST00000415779 2006 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 FRMPD2B-201ENST00000431305 1347 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 HSPA7-201ENST00000445535 1927 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC019193.1-201ENST00000506678 823 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AL109837.1-201ENST00000603272 613 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 MIR6727-201ENST00000620702 65 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC007718.1-201ENST00000621078 280 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 AC092299.1-201ENST00000632679 757 ntBASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA1Q9UND3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms