Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SDCBP2P1-201ENST00000416115 614 ntBASIC12.88□□□□□ -0.35
CHD8Q9HCK8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 KRT18P40-201ENST00000599859 1571 ntBASIC12.88□□□□□ -0.35
CHD8Q9HCK8 CARS-216ENST00000639317 135 ntTSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 TPI1P3-201ENST00000335020 740 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 RN7SL452P-201ENST00000482923 291 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 RN7SL5P-201ENST00000581458 321 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AC137723.2-201ENST00000623540 398 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 PES1P2-201ENST00000449745 1735 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 IGHVII-74-1-201ENST00000517572 241 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AC011773.4-202ENST00000566000 1264 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AL031673.1-201ENST00000611460 466 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 AC073592.10-201ENST00000624789 597 ntBASIC12.87□□□□□ -0.35
CHD8Q9HCK8 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.87□□□□□ -0.35
CHD8Q9HCK8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC12.86□□□□□ -0.35
CHD8Q9HCK8 AC138907.9-201ENST00000623747 986 ntBASIC12.86□□□□□ -0.35
CHD8Q9HCK8 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 PMF1-201ENST00000368273 884 ntTSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 HMGN1P4-201ENST00000419500 290 ntBASIC12.86□□□□□ -0.35
CHD8Q9HCK8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms