RNA–Protein interactions for RNA: ENST00000599859.2

KRT18P40-201, Transcript of keratin 18 pseudogene 40, humanhuman

BASIC

Gene KRT18P40, Length 1,571 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P40-201ENST00000599859 NISCHQ9Y2I1 1504 aa30.84■■■□□ 2.53
KRT18P40-201ENST00000599859 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
KRT18P40-201ENST00000599859 ABCC9O60706 1549 aa27.07■■□□□ 1.92
KRT18P40-201ENST00000599859 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
KRT18P40-201ENST00000599859 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
KRT18P40-201ENST00000599859 DCAF1Q9Y4B6 1507 aa25.5■■□□□ 1.67
KRT18P40-201ENST00000599859 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
KRT18P40-201ENST00000599859 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
KRT18P40-201ENST00000599859 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
KRT18P40-201ENST00000599859 NACADO15069 1562 aa25.2■■□□□ 1.62
KRT18P40-201ENST00000599859 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
KRT18P40-201ENST00000599859 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
KRT18P40-201ENST00000599859 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
KRT18P40-201ENST00000599859 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.53
KRT18P40-201ENST00000599859 BICRAQ9NZM4 1560 aa24.62■■□□□ 1.53
KRT18P40-201ENST00000599859 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
KRT18P40-201ENST00000599859 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
KRT18P40-201ENST00000599859 CC2D2AQ9P2K1 1620 aa24.33■■□□□ 1.48
KRT18P40-201ENST00000599859 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
KRT18P40-201ENST00000599859 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
KRT18P40-201ENST00000599859 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
KRT18P40-201ENST00000599859 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
KRT18P40-201ENST00000599859 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
KRT18P40-201ENST00000599859 SMARCA4P51532 1647 aa23.8■■□□□ 1.4
KRT18P40-201ENST00000599859 WIZO95785 1651 aa23.67■■□□□ 1.38
KRT18P40-201ENST00000599859 CUX2O14529 1486 aa23.55■■□□□ 1.36
KRT18P40-201ENST00000599859 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
KRT18P40-201ENST00000599859 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
KRT18P40-201ENST00000599859 SMARCA2P51531 1590 aa23.41■■□□□ 1.34
KRT18P40-201ENST00000599859 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
KRT18P40-201ENST00000599859 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.34
KRT18P40-201ENST00000599859 BAZ1BQ9UIG0 1483 aaKnown RBP23.28■■□□□ 1.32
KRT18P40-201ENST00000599859 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
KRT18P40-201ENST00000599859 NCAPD3P42695 1498 aa23.2■■□□□ 1.3
KRT18P40-201ENST00000599859 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
KRT18P40-201ENST00000599859 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
KRT18P40-201ENST00000599859 NESP48681 1621 aa23.03■■□□□ 1.28
KRT18P40-201ENST00000599859 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.24
KRT18P40-201ENST00000599859 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
KRT18P40-201ENST00000599859 PDS5BQ9NTI5 1447 aa22.73■■□□□ 1.23
KRT18P40-201ENST00000599859 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
KRT18P40-201ENST00000599859 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
KRT18P40-201ENST00000599859 CFTRP13569 1480 aa22.64■■□□□ 1.22
KRT18P40-201ENST00000599859 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
KRT18P40-201ENST00000599859 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
KRT18P40-201ENST00000599859 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
KRT18P40-201ENST00000599859 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
KRT18P40-201ENST00000599859 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
KRT18P40-201ENST00000599859 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
KRT18P40-201ENST00000599859 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
KRT18P40-201ENST00000599859 WDR62O43379 1518 aa22.42■■□□□ 1.18
KRT18P40-201ENST00000599859 FANCD2Q9BXW9 1451 aa22.39■■□□□ 1.17
KRT18P40-201ENST00000599859 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
KRT18P40-201ENST00000599859 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
KRT18P40-201ENST00000599859 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
KRT18P40-201ENST00000599859 CUX1P39880 1505 aa22.3■■□□□ 1.16
KRT18P40-201ENST00000599859 DNMBPQ6XZF7 1577 aa22.19■■□□□ 1.14
KRT18P40-201ENST00000599859 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
KRT18P40-201ENST00000599859 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
KRT18P40-201ENST00000599859 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
KRT18P40-201ENST00000599859 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
KRT18P40-201ENST00000599859 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
KRT18P40-201ENST00000599859 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
KRT18P40-201ENST00000599859 SOGA1O94964 1423 aa22.09■■□□□ 1.13
KRT18P40-201ENST00000599859 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
KRT18P40-201ENST00000599859 TRHP20396 242 aaPredicted RBP22.05■■□□□ 1.12
KRT18P40-201ENST00000599859 CYB5RLQ6IPT4 315 aa22.04■■□□□ 1.12
KRT18P40-201ENST00000599859 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
KRT18P40-201ENST00000599859 EEA1Q15075 1411 aa22.02■■□□□ 1.12
KRT18P40-201ENST00000599859 ARHGEF11O15085 1522 aa22■■□□□ 1.11
KRT18P40-201ENST00000599859 POLA1P09884 1462 aaPredicted RBP22■■□□□ 1.11
KRT18P40-201ENST00000599859 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
KRT18P40-201ENST00000599859 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
KRT18P40-201ENST00000599859 LOC105371045A0A1W2PR82 267 aa21.91■■□□□ 1.1
KRT18P40-201ENST00000599859 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
KRT18P40-201ENST00000599859 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
KRT18P40-201ENST00000599859 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
KRT18P40-201ENST00000599859 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
KRT18P40-201ENST00000599859 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
KRT18P40-201ENST00000599859 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
KRT18P40-201ENST00000599859 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
KRT18P40-201ENST00000599859 EHMT2Q96KQ7 1210 aa21.83■■□□□ 1.09
KRT18P40-201ENST00000599859 KIF21BO75037 1637 aa21.81■■□□□ 1.08
KRT18P40-201ENST00000599859 FBLN2P98095 1184 aa21.8■■□□□ 1.08
KRT18P40-201ENST00000599859 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.08
KRT18P40-201ENST00000599859 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
KRT18P40-201ENST00000599859 ARAP1Q96P48 1450 aa21.74■■□□□ 1.07
KRT18P40-201ENST00000599859 TDRD9Q8NDG6 1382 aaKnown RBP21.69■■□□□ 1.06
KRT18P40-201ENST00000599859 PRXQ9BXM0 1461 aa21.69■■□□□ 1.06
KRT18P40-201ENST00000599859 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
KRT18P40-201ENST00000599859 PBRM1Q86U86 1689 aa21.68■■□□□ 1.06
KRT18P40-201ENST00000599859 EIF4G3O43432 1585 aaKnown RBP21.67■■□□□ 1.06
KRT18P40-201ENST00000599859 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.06
KRT18P40-201ENST00000599859 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
KRT18P40-201ENST00000599859 RAPGEF2Q9Y4G8 1499 aa21.67■■□□□ 1.06
KRT18P40-201ENST00000599859 IGF1RP08069 1367 aa21.67■■□□□ 1.06
KRT18P40-201ENST00000599859 CUL7Q14999 1698 aa21.65■■□□□ 1.06
KRT18P40-201ENST00000599859 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
KRT18P40-201ENST00000599859 CHD1O14646 1710 aa21.59■■□□□ 1.05
KRT18P40-201ENST00000599859 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms