Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 MIR663B-201ENST00000408361 115 ntBASIC14.78□□□□□ -0.04
SCG3Q8WXD2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 AL096828.3-201ENST00000615354 462 ntBASIC14.78□□□□□ -0.04
SCG3Q8WXD2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 AL139099.5-201ENST00000635274 300 ntBASIC14.78□□□□□ -0.04
SCG3Q8WXD2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
SCG3Q8WXD2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 AL590440.2-201ENST00000641973 1595 ntBASIC14.77□□□□□ -0.04
SCG3Q8WXD2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 KRT8P4-201ENST00000509735 1454 ntBASIC14.77□□□□□ -0.04
SCG3Q8WXD2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 FKBP4P6-201ENST00000457486 1332 ntBASIC14.77□□□□□ -0.04
SCG3Q8WXD2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCG3Q8WXD2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 RN7SKP175-201ENST00000408472 289 ntBASIC14.77□□□□□ -0.05
SCG3Q8WXD2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 CALR4P-201ENST00000431943 946 ntBASIC14.77□□□□□ -0.05
SCG3Q8WXD2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 AC091804.1-201ENST00000486888 567 ntBASIC14.77□□□□□ -0.05
SCG3Q8WXD2 SCARNA20.5-201ENST00000516991 142 ntBASIC14.77□□□□□ -0.05
SCG3Q8WXD2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 AC008825.2-201ENST00000603374 718 ntBASIC14.77□□□□□ -0.05
SCG3Q8WXD2 Z99916.3-201ENST00000623422 1080 ntBASIC14.77□□□□□ -0.05
SCG3Q8WXD2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCG3Q8WXD2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCG3Q8WXD2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
SCG3Q8WXD2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SCG3Q8WXD2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SCG3Q8WXD2 AC138028.6-201ENST00000616106 1482 ntBASIC14.76□□□□□ -0.05
SCG3Q8WXD2 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SCG3Q8WXD2 AC139712.1-201ENST00000378256 1875 ntBASIC14.76□□□□□ -0.05
SCG3Q8WXD2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms