Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC011462.4-201ENST00000616866 449 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 AC126755.5-201ENST00000622756 267 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 AL590824.1-201ENST00000403828 1349 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6BP35913 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDE6BP35913 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PDE6BP35913 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PDE6BP35913 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PDE6BP35913 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6BP35913 DKKL1P1-201ENST00000400550 698 ntBASIC17.38■□□□□ 0.37
PDE6BP35913 HMGA1P1-201ENST00000415560 1062 ntBASIC17.38■□□□□ 0.37
PDE6BP35913 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PDE6BP35913 CDCA4P4-201ENST00000435216 680 ntBASIC17.38■□□□□ 0.37
PDE6BP35913 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6BP35913 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6BP35913 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17.38■□□□□ 0.37
PDE6BP35913 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6BP35913 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6BP35913 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6BP35913 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6BP35913 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDE6BP35913 GGNBP1-204ENST00000613113 887 ntBASIC17.38■□□□□ 0.37
PDE6BP35913 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
PDE6BP35913 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6BP35913 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDE6BP35913 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6BP35913 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6BP35913 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.37■□□□□ 0.37
PDE6BP35913 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PDE6BP35913 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PDE6BP35913 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDE6BP35913 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 AC027612.2-202ENST00000445955 1199 ntBASIC17.37■□□□□ 0.37
PDE6BP35913 AC025594.1-201ENST00000469533 543 ntBASIC17.37■□□□□ 0.37
PDE6BP35913 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.37■□□□□ 0.37
PDE6BP35913 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.37■□□□□ 0.37
PDE6BP35913 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PDE6BP35913 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.37■□□□□ 0.37
PDE6BP35913 AC004686.1-201ENST00000605113 538 ntBASIC17.37■□□□□ 0.37
PDE6BP35913 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 FLJ16779-201ENST00000612722 7638 ntBASIC17.37■□□□□ 0.37
PDE6BP35913 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 AC092115.1-201ENST00000566277 1402 ntBASIC17.37■□□□□ 0.37
PDE6BP35913 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6BP35913 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6BP35913 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.37■□□□□ 0.37
PDE6BP35913 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.36■□□□□ 0.37
PDE6BP35913 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6BP35913 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms