Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1DP16402 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1DP16402 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1DP16402 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1DP16402 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1DP16402 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1DP16402 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H1DP16402 AC125807.2-201ENST00000513358 3514 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 DLX4-206ENST00000611342 1662 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 SERBP1P5-201ENST00000510079 1181 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 RNA5SP421-201ENST00000516864 134 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 PTP4A1P2-201ENST00000546033 454 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 OR10B1P-201ENST00000601666 907 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 ECM1P1-201ENST00000604092 1279 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 POM121L14P-201ENST00000406100 1558 ntBASIC12.17□□□□□ -0.46
HIST1H1DP16402 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1DP16402 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1DP16402 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 AC004623.1-201ENST00000624592 2127 ntBASIC12.16□□□□□ -0.46
HIST1H1DP16402 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1DP16402 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1DP16402 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms