Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.57□□□□□ -0.24
MT-ND1P03886 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.57□□□□□ -0.24
MT-ND1P03886 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 FAM207CP-201ENST00000443486 507 ntBASIC13.57□□□□□ -0.24
MT-ND1P03886 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.57□□□□□ -0.24
MT-ND1P03886 AP001063.1-201ENST00000568332 529 ntBASIC13.57□□□□□ -0.24
MT-ND1P03886 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.57□□□□□ -0.24
MT-ND1P03886 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.57□□□□□ -0.24
MT-ND1P03886 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.57□□□□□ -0.24
MT-ND1P03886 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
MT-ND1P03886 AC138696.2-201ENST00000607376 223 ntBASIC13.57□□□□□ -0.24
MT-ND1P03886 BAP1-211ENST00000615113 489 ntBASIC13.57□□□□□ -0.24
MT-ND1P03886 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.57□□□□□ -0.24
MT-ND1P03886 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
MT-ND1P03886 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 AP000437.1-201ENST00000624057 2085 ntBASIC13.57□□□□□ -0.24
MT-ND1P03886 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 CICP1-201ENST00000416803 2410 ntBASIC13.56□□□□□ -0.24
MT-ND1P03886 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
MT-ND1P03886 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 AL162726.2-201ENST00000438986 1017 ntBASIC13.56□□□□□ -0.24
MT-ND1P03886 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.56□□□□□ -0.24
MT-ND1P03886 ELK1P1-201ENST00000485699 580 ntBASIC13.56□□□□□ -0.24
MT-ND1P03886 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.56□□□□□ -0.24
MT-ND1P03886 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.56□□□□□ -0.24
MT-ND1P03886 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.56□□□□□ -0.24
MT-ND1P03886 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC13.56□□□□□ -0.24
MT-ND1P03886 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MT-ND1P03886 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MT-ND1P03886 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MT-ND1P03886 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms