Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
EXTL3O43909 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.47■□□□□ 0.07
EXTL3O43909 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.47■□□□□ 0.07
EXTL3O43909 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.47■□□□□ 0.07
EXTL3O43909 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.47■□□□□ 0.07
EXTL3O43909 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.47■□□□□ 0.07
EXTL3O43909 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.47■□□□□ 0.07
EXTL3O43909 AL353637.1-201ENST00000451571 732 ntBASIC15.47■□□□□ 0.07
EXTL3O43909 CHCHD2P2-201ENST00000503744 321 ntBASIC15.47■□□□□ 0.07
EXTL3O43909 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.47■□□□□ 0.07
EXTL3O43909 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
EXTL3O43909 AC020922.3-201ENST00000595064 547 ntBASIC15.47■□□□□ 0.07
EXTL3O43909 AL359881.3-201ENST00000602640 1721 ntBASIC15.47■□□□□ 0.07
EXTL3O43909 AL109837.1-201ENST00000603272 613 ntBASIC15.47■□□□□ 0.07
EXTL3O43909 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.47■□□□□ 0.07
EXTL3O43909 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.47■□□□□ 0.07
EXTL3O43909 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.47■□□□□ 0.07
EXTL3O43909 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
EXTL3O43909 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
EXTL3O43909 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
EXTL3O43909 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EXTL3O43909 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.46■□□□□ 0.07
EXTL3O43909 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.46■□□□□ 0.07
EXTL3O43909 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.46■□□□□ 0.07
EXTL3O43909 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.46■□□□□ 0.07
EXTL3O43909 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.46■□□□□ 0.07
EXTL3O43909 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
EXTL3O43909 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.46■□□□□ 0.07
EXTL3O43909 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.46■□□□□ 0.07
EXTL3O43909 MPRIPP1-201ENST00000452433 1089 ntBASIC15.46■□□□□ 0.07
EXTL3O43909 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.46■□□□□ 0.07
EXTL3O43909 RN7SL258P-201ENST00000478664 300 ntBASIC15.46■□□□□ 0.07
EXTL3O43909 TMEM198B-204ENST00000484016 896 ntBASIC15.46■□□□□ 0.07
EXTL3O43909 NUP210P1-202ENST00000504322 710 ntBASIC15.46■□□□□ 0.07
EXTL3O43909 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.46■□□□□ 0.07
EXTL3O43909 RN7SL574P-201ENST00000581512 297 ntBASIC15.46■□□□□ 0.07
EXTL3O43909 MIR4706-201ENST00000582134 82 ntBASIC15.46■□□□□ 0.07
EXTL3O43909 MIR4754-201ENST00000582477 89 ntBASIC15.46■□□□□ 0.07
EXTL3O43909 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EXTL3O43909 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.46■□□□□ 0.07
EXTL3O43909 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.46■□□□□ 0.07
EXTL3O43909 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
EXTL3O43909 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
EXTL3O43909 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
EXTL3O43909 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.46■□□□□ 0.06
EXTL3O43909 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
EXTL3O43909 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
EXTL3O43909 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
EXTL3O43909 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
EXTL3O43909 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
EXTL3O43909 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EXTL3O43909 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
EXTL3O43909 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
EXTL3O43909 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
EXTL3O43909 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.45■□□□□ 0.06
EXTL3O43909 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.45■□□□□ 0.06
EXTL3O43909 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms