Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 AL672207.1-201ENST00000328462 1570 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 SBF1P1-201ENST00000444527 5631 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 FUCA1P1-201ENST00000374476 1351 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 COX20P1-201ENST00000366529 357 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CHCHD2P2-201ENST00000503744 321 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 AC093826.1-201ENST00000508655 993 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 AC012158.2-201ENST00000536546 354 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 AC092053.3-201ENST00000641308 4975 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 ODCP-201ENST00000459650 1639 ntBASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC187A0A096LP49 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms