Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 AC136604.1-202ENST00000425471 771 ntBASIC12.44□□□□□ -0.42
BEST4Q8NFU0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 AL589987.1-201ENST00000453380 819 ntBASIC12.44□□□□□ -0.42
BEST4Q8NFU0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 RARRES2P5-201ENST00000564013 466 ntBASIC12.44□□□□□ -0.42
BEST4Q8NFU0 SNHG9-202ENST00000564014 471 ntBASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 AP001972.5-201ENST00000624624 2338 ntBASIC12.44□□□□□ -0.42
BEST4Q8NFU0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 BX842568.4-201ENST00000421222 227 ntBASIC12.43□□□□□ -0.42
BEST4Q8NFU0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 SRD5A3P1-201ENST00000603021 949 ntBASIC12.43□□□□□ -0.42
BEST4Q8NFU0 AL158211.3-201ENST00000607385 239 ntBASIC12.43□□□□□ -0.42
BEST4Q8NFU0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 AL662799.1-202ENST00000614205 422 ntBASIC12.43□□□□□ -0.42
BEST4Q8NFU0 AL590560.3-201ENST00000623350 461 ntBASIC12.43□□□□□ -0.42
BEST4Q8NFU0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 DNM1P41-201ENST00000623634 3350 ntBASIC12.43□□□□□ -0.42
BEST4Q8NFU0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 AC060814.4-201ENST00000594169 2163 ntBASIC12.43□□□□□ -0.42
BEST4Q8NFU0 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms