Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 MED11-202ENST00000573708 802 ntTSL 2 BASIC18.79■□□□□ 0.6
ZC3H6P61129 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC18.79■□□□□ 0.6
ZC3H6P61129 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC18.79■□□□□ 0.6
ZC3H6P61129 AC006116.2-201ENST00000589958 988 ntBASIC18.79■□□□□ 0.6
ZC3H6P61129 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZC3H6P61129 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZC3H6P61129 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.79■□□□□ 0.6
ZC3H6P61129 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZC3H6P61129 AL022313.4-201ENST00000562756 2046 ntBASIC18.79■□□□□ 0.6
ZC3H6P61129 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZC3H6P61129 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.79■□□□□ 0.6
ZC3H6P61129 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZC3H6P61129 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.79■□□□□ 0.6
ZC3H6P61129 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ZC3H6P61129 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.79■□□□□ 0.6
ZC3H6P61129 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZC3H6P61129 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.79■□□□□ 0.6
ZC3H6P61129 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZC3H6P61129 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZC3H6P61129 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.78■□□□□ 0.6
ZC3H6P61129 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZC3H6P61129 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.78■□□□□ 0.6
ZC3H6P61129 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC18.78■□□□□ 0.6
ZC3H6P61129 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 ACTBP14-201ENST00000411655 1089 ntBASIC18.78■□□□□ 0.6
ZC3H6P61129 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 KRT8P30-201ENST00000432100 650 ntBASIC18.78■□□□□ 0.6
ZC3H6P61129 EEF1DP2-201ENST00000433698 843 ntBASIC18.78■□□□□ 0.6
ZC3H6P61129 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC18.78■□□□□ 0.6
ZC3H6P61129 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC18.78■□□□□ 0.6
ZC3H6P61129 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC18.78■□□□□ 0.6
ZC3H6P61129 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 AC120498.7-201ENST00000562876 330 ntBASIC18.78■□□□□ 0.6
ZC3H6P61129 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ZC3H6P61129 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC18.78■□□□□ 0.6
ZC3H6P61129 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZC3H6P61129 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.78■□□□□ 0.6
ZC3H6P61129 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC18.77■□□□□ 0.6
ZC3H6P61129 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
ZC3H6P61129 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.77■□□□□ 0.6
ZC3H6P61129 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
ZC3H6P61129 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC18.77■□□□□ 0.6
ZC3H6P61129 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.77■□□□□ 0.6
ZC3H6P61129 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC18.77■□□□□ 0.6
ZC3H6P61129 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC18.77■□□□□ 0.6
ZC3H6P61129 SOD2-205ENST00000444946 917 ntTSL 2 BASIC18.77■□□□□ 0.6
ZC3H6P61129 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZC3H6P61129 AC022447.6-201ENST00000515522 438 ntBASIC18.77■□□□□ 0.6
ZC3H6P61129 MIR2278-201ENST00000516344 96 ntBASIC18.77■□□□□ 0.6
ZC3H6P61129 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC18.77■□□□□ 0.6
ZC3H6P61129 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC18.77■□□□□ 0.6
ZC3H6P61129 RN7SL605P-201ENST00000577229 281 ntBASIC18.77■□□□□ 0.6
ZC3H6P61129 MIR4254-201ENST00000581063 76 ntBASIC18.77■□□□□ 0.6
ZC3H6P61129 AC010531.8-201ENST00000623341 685 ntBASIC18.77■□□□□ 0.6
ZC3H6P61129 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZC3H6P61129 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
ZC3H6P61129 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZC3H6P61129 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
ZC3H6P61129 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZC3H6P61129 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ZC3H6P61129 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZC3H6P61129 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZC3H6P61129 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.77■□□□□ 0.59
ZC3H6P61129 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H6P61129 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC18.76■□□□□ 0.59
ZC3H6P61129 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ZC3H6P61129 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H6P61129 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
ZC3H6P61129 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZC3H6P61129 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms