Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL15A1P39059 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COL15A1P39059 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.83■□□□□ 0.45
COL15A1P39059 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.83■□□□□ 0.45
COL15A1P39059 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 EEF1DP2-201ENST00000433698 843 ntBASIC17.83■□□□□ 0.45
COL15A1P39059 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.83■□□□□ 0.45
COL15A1P39059 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.83■□□□□ 0.45
COL15A1P39059 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.83■□□□□ 0.45
COL15A1P39059 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.83■□□□□ 0.45
COL15A1P39059 AC132825.4-202ENST00000578792 434 ntBASIC17.83■□□□□ 0.45
COL15A1P39059 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.83■□□□□ 0.45
COL15A1P39059 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL15A1P39059 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
COL15A1P39059 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.83■□□□□ 0.44
COL15A1P39059 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.83■□□□□ 0.44
COL15A1P39059 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
COL15A1P39059 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
COL15A1P39059 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.83■□□□□ 0.44
COL15A1P39059 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COL15A1P39059 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.83■□□□□ 0.44
COL15A1P39059 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL15A1P39059 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.82■□□□□ 0.44
COL15A1P39059 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
COL15A1P39059 AL929302.1-201ENST00000426556 871 ntBASIC17.82■□□□□ 0.44
COL15A1P39059 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.82■□□□□ 0.44
COL15A1P39059 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 AC068831.5-201ENST00000557387 328 ntBASIC17.82■□□□□ 0.44
COL15A1P39059 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.82■□□□□ 0.44
COL15A1P39059 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.82■□□□□ 0.44
COL15A1P39059 AL136982.5-201ENST00000605222 294 ntBASIC17.82■□□□□ 0.44
COL15A1P39059 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.82■□□□□ 0.44
COL15A1P39059 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.82■□□□□ 0.44
COL15A1P39059 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COL15A1P39059 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.82■□□□□ 0.44
COL15A1P39059 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.82■□□□□ 0.44
COL15A1P39059 AC139749.1-202ENST00000617529 3139 ntBASIC17.82■□□□□ 0.44
COL15A1P39059 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.82■□□□□ 0.44
COL15A1P39059 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL15A1P39059 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.81■□□□□ 0.44
COL15A1P39059 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL15A1P39059 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.81■□□□□ 0.44
COL15A1P39059 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
COL15A1P39059 ABCD1P4-201ENST00000399687 604 ntBASIC17.81■□□□□ 0.44
COL15A1P39059 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COL15A1P39059 OR2W2P-201ENST00000406313 909 ntBASIC17.81■□□□□ 0.44
COL15A1P39059 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.81■□□□□ 0.44
COL15A1P39059 ASS1P2-201ENST00000439895 1223 ntBASIC17.81■□□□□ 0.44
COL15A1P39059 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.81■□□□□ 0.44
COL15A1P39059 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.81■□□□□ 0.44
COL15A1P39059 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.81■□□□□ 0.44
COL15A1P39059 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.81■□□□□ 0.44
COL15A1P39059 AC012617.1-204ENST00000586340 2305 ntBASIC17.81■□□□□ 0.44
COL15A1P39059 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.81■□□□□ 0.44
COL15A1P39059 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.81■□□□□ 0.44
COL15A1P39059 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL15A1P39059 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 AC004554.1-201ENST00000422830 1468 ntBASIC17.81■□□□□ 0.44
COL15A1P39059 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms