Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.83■□□□□ 0.61
USP6P35125 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
USP6P35125 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC18.83■□□□□ 0.61
USP6P35125 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC18.83■□□□□ 0.61
USP6P35125 PGK1P2-201ENST00000431702 1214 ntBASIC18.83■□□□□ 0.61
USP6P35125 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
USP6P35125 RPS18P9-201ENST00000482817 460 ntBASIC18.83■□□□□ 0.61
USP6P35125 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP6P35125 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
USP6P35125 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.83■□□□□ 0.61
USP6P35125 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP6P35125 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP6P35125 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC18.83■□□□□ 0.6
USP6P35125 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.83■□□□□ 0.6
USP6P35125 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC18.83■□□□□ 0.6
USP6P35125 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP6P35125 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC18.83■□□□□ 0.6
USP6P35125 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC18.83■□□□□ 0.6
USP6P35125 AC078814.4-201ENST00000546650 327 ntBASIC18.83■□□□□ 0.6
USP6P35125 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP6P35125 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
USP6P35125 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6P35125 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6P35125 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP6P35125 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6P35125 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP6P35125 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP6P35125 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
USP6P35125 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
USP6P35125 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6P35125 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC18.82■□□□□ 0.6
USP6P35125 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6P35125 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.81■□□□□ 0.6
USP6P35125 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC18.81■□□□□ 0.6
USP6P35125 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
USP6P35125 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.81■□□□□ 0.6
USP6P35125 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 BX640514.1-201ENST00000583223 1918 ntBASIC18.81■□□□□ 0.6
USP6P35125 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.81■□□□□ 0.6
USP6P35125 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6P35125 HNRNPA1P21-201ENST00000424115 961 ntBASIC18.81■□□□□ 0.6
USP6P35125 RPSAP12-201ENST00000435879 888 ntBASIC18.81■□□□□ 0.6
USP6P35125 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC18.81■□□□□ 0.6
USP6P35125 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC18.81■□□□□ 0.6
USP6P35125 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC18.81■□□□□ 0.6
USP6P35125 MIR4746-201ENST00000579802 71 ntBASIC18.81■□□□□ 0.6
USP6P35125 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
USP6P35125 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms