Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CHGBP05060 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.1■□□□□ 0.33
CHGBP05060 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.1■□□□□ 0.33
CHGBP05060 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHGBP05060 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHGBP05060 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.09■□□□□ 0.33
CHGBP05060 AL807761.2-201ENST00000422849 729 ntBASIC17.09■□□□□ 0.33
CHGBP05060 EEF1DP6-201ENST00000449232 372 ntBASIC17.09■□□□□ 0.33
CHGBP05060 AP000358.1-201ENST00000456260 156 ntBASIC17.09■□□□□ 0.33
CHGBP05060 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.09■□□□□ 0.33
CHGBP05060 AC079328.1-201ENST00000560358 952 ntBASIC17.09■□□□□ 0.33
CHGBP05060 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.09■□□□□ 0.33
CHGBP05060 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 SHMT1P1-201ENST00000419974 1312 ntBASIC17.09■□□□□ 0.33
CHGBP05060 FAM90A2P-201ENST00000511144 1395 ntBASIC17.09■□□□□ 0.33
CHGBP05060 FAM90A25P-201ENST00000528404 1395 ntBASIC17.09■□□□□ 0.33
CHGBP05060 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.09■□□□□ 0.33
CHGBP05060 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
CHGBP05060 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHGBP05060 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHGBP05060 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.09■□□□□ 0.33
CHGBP05060 AC023794.5-201ENST00000564380 2157 ntBASIC17.09■□□□□ 0.33
CHGBP05060 AC089987.1-201ENST00000551654 2209 ntBASIC17.09■□□□□ 0.33
CHGBP05060 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHGBP05060 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHGBP05060 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHGBP05060 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHGBP05060 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.08■□□□□ 0.33
CHGBP05060 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHGBP05060 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHGBP05060 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHGBP05060 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CHGBP05060 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CHGBP05060 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHGBP05060 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.08■□□□□ 0.33
CHGBP05060 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CHGBP05060 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHGBP05060 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHGBP05060 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.08■□□□□ 0.32
CHGBP05060 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.08■□□□□ 0.32
CHGBP05060 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
CHGBP05060 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 AC103592.1-201ENST00000394513 664 ntBASIC17.08■□□□□ 0.32
CHGBP05060 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.08■□□□□ 0.32
CHGBP05060 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.08■□□□□ 0.32
CHGBP05060 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHGBP05060 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.08■□□□□ 0.32
CHGBP05060 AC138894.2-201ENST00000602838 371 ntBASIC17.08■□□□□ 0.32
CHGBP05060 AC007326.1-201ENST00000604539 458 ntBASIC17.08■□□□□ 0.32
CHGBP05060 AC009560.1-201ENST00000620208 434 ntBASIC17.08■□□□□ 0.32
CHGBP05060 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.08■□□□□ 0.32
CHGBP05060 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHGBP05060 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CHGBP05060 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CHGBP05060 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.08■□□□□ 0.32
CHGBP05060 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC17.08■□□□□ 0.32
CHGBP05060 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHGBP05060 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHGBP05060 AC010327.5-201ENST00000586923 3061 ntBASIC17.07■□□□□ 0.32
CHGBP05060 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHGBP05060 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHGBP05060 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHGBP05060 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms