Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AC239868.1-201ENST00000369385 493 ntBASIC15.37■□□□□ 0.05
HLA-DRAP01903 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AC091544.8-201ENST00000619490 361 ntBASIC15.37■□□□□ 0.05
HLA-DRAP01903 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 SHMT1P1-201ENST00000419974 1312 ntBASIC15.37■□□□□ 0.05
HLA-DRAP01903 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DRAP01903 AL928654.5-201ENST00000624831 2501 ntBASIC15.37■□□□□ 0.05
HLA-DRAP01903 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DRAP01903 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.36■□□□□ 0.05
HLA-DRAP01903 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 AL008707.1-201ENST00000422498 534 ntBASIC15.36■□□□□ 0.05
HLA-DRAP01903 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 AL596276.2-201ENST00000447525 331 ntBASIC15.36■□□□□ 0.05
HLA-DRAP01903 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 AC090857.1-201ENST00000527400 390 ntBASIC15.36■□□□□ 0.05
HLA-DRAP01903 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 MIR6787-201ENST00000616675 61 ntBASIC15.36■□□□□ 0.05
HLA-DRAP01903 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DRAP01903 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRAP01903 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 BEND3P1-201ENST00000421591 1944 ntBASIC15.35■□□□□ 0.05
HLA-DRAP01903 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 AC023794.5-201ENST00000564380 2157 ntBASIC15.35■□□□□ 0.05
HLA-DRAP01903 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms