Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPCS1Q9Y6A9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPCS1Q9Y6A9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPCS1Q9Y6A9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SPCS1Q9Y6A9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPCS1Q9Y6A9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.58■□□□□ 0.09
SPCS1Q9Y6A9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
SPCS1Q9Y6A9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.58■□□□□ 0.09
SPCS1Q9Y6A9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SPCS1Q9Y6A9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SPCS1Q9Y6A9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.58■□□□□ 0.08
SPCS1Q9Y6A9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPCS1Q9Y6A9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.56■□□□□ 0.08
SPCS1Q9Y6A9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPCS1Q9Y6A9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 AC242852.2-201ENST00000615738 1807 ntBASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SPCS1Q9Y6A9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS1Q9Y6A9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms