Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VRK2Q86Y07 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VRK2Q86Y07 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
VRK2Q86Y07 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.88■□□□□ 0.93
VRK2Q86Y07 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK2Q86Y07 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
VRK2Q86Y07 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK2Q86Y07 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.86■□□□□ 0.93
VRK2Q86Y07 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VRK2Q86Y07 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 SNX5-217ENST00000606557 1087 ntBASIC20.85■□□□□ 0.93
VRK2Q86Y07 AC137630.3-201ENST00000607245 391 ntBASIC20.85■□□□□ 0.93
VRK2Q86Y07 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK2Q86Y07 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.85■□□□□ 0.93
VRK2Q86Y07 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK2Q86Y07 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VRK2Q86Y07 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VRK2Q86Y07 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VRK2Q86Y07 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
VRK2Q86Y07 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.83■□□□□ 0.93
VRK2Q86Y07 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VRK2Q86Y07 AC079630.1-202ENST00000618127 1840 ntBASIC20.83■□□□□ 0.92
VRK2Q86Y07 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VRK2Q86Y07 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VRK2Q86Y07 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.82■□□□□ 0.92
VRK2Q86Y07 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.82■□□□□ 0.92
VRK2Q86Y07 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VRK2Q86Y07 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK2Q86Y07 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.81■□□□□ 0.92
VRK2Q86Y07 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK2Q86Y07 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
VRK2Q86Y07 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms