Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AL022069.1-201ENST00000568025 1636 ntBASIC23.23■■□□□ 1.31
CCDC25Q86WR0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 AL592293.1-201ENST00000502889 1188 ntBASIC23.23■■□□□ 1.31
CCDC25Q86WR0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC25Q86WR0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC25Q86WR0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 MIR4449-201ENST00000578365 66 ntBASIC23.21■■□□□ 1.31
CCDC25Q86WR0 AC087393.1-201ENST00000582896 145 ntBASIC23.21■■□□□ 1.31
CCDC25Q86WR0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CCDC25Q86WR0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CCDC25Q86WR0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC25Q86WR0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC25Q86WR0 LINC00526-201ENST00000581067 1875 ntBASIC23.19■■□□□ 1.3
CCDC25Q86WR0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC25Q86WR0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
CCDC25Q86WR0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC25Q86WR0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC25Q86WR0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC25Q86WR0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CCDC25Q86WR0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC25Q86WR0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CCDC25Q86WR0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC25Q86WR0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC25Q86WR0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CCDC25Q86WR0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 MIR6765-201ENST00000614092 87 ntBASIC23.16■■□□□ 1.3
CCDC25Q86WR0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
CCDC25Q86WR0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CCDC25Q86WR0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC25Q86WR0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.14■■□□□ 1.3
CCDC25Q86WR0 DUX4L9-201ENST00000449051 1259 ntBASIC23.14■■□□□ 1.29
CCDC25Q86WR0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC25Q86WR0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms