Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 KRT18P24-201ENST00000344739 1156 ntBASIC19.5■□□□□ 0.71
ATP1B3P54709 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP1B3P54709 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP1B3P54709 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP1B3P54709 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP1B3P54709 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP1B3P54709 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP1B3P54709 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATP1B3P54709 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP1B3P54709 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP1B3P54709 ALDH1A3-203ENST00000557963 1670 ntBASIC19.49■□□□□ 0.71
ATP1B3P54709 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP1B3P54709 ANOS2P-203ENST00000472227 1816 ntBASIC19.48■□□□□ 0.71
ATP1B3P54709 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP1B3P54709 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP1B3P54709 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP1B3P54709 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP1B3P54709 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATP1B3P54709 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP1B3P54709 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP1B3P54709 AC010980.1-201ENST00000587192 1142 ntBASIC19.48■□□□□ 0.71
ATP1B3P54709 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP1B3P54709 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP1B3P54709 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
ATP1B3P54709 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP1B3P54709 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP1B3P54709 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATP1B3P54709 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP1B3P54709 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ATP1B3P54709 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP1B3P54709 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ATP1B3P54709 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP1B3P54709 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ATP1B3P54709 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ATP1B3P54709 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP1B3P54709 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP1B3P54709 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP1B3P54709 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP1B3P54709 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP1B3P54709 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP1B3P54709 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP1B3P54709 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ATP1B3P54709 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ATP1B3P54709 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ATP1B3P54709 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP1B3P54709 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP1B3P54709 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP1B3P54709 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ATP1B3P54709 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP1B3P54709 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
ATP1B3P54709 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP1B3P54709 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP1B3P54709 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ATP1B3P54709 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP1B3P54709 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP1B3P54709 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP1B3P54709 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP1B3P54709 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP1B3P54709 PVT1_1.1-201ENST00000615125 194 ntBASIC19.46■□□□□ 0.71
ATP1B3P54709 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP1B3P54709 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP1B3P54709 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP1B3P54709 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP1B3P54709 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP1B3P54709 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ATP1B3P54709 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP1B3P54709 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP1B3P54709 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP1B3P54709 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP1B3P54709 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP1B3P54709 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP1B3P54709 MIR4281-201ENST00000580852 62 ntBASIC19.45■□□□□ 0.7
ATP1B3P54709 AC012354.3-201ENST00000623734 483 ntBASIC19.45■□□□□ 0.7
ATP1B3P54709 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP1B3P54709 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP1B3P54709 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP1B3P54709 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP1B3P54709 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP1B3P54709 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ATP1B3P54709 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP1B3P54709 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP1B3P54709 AC092068.2-201ENST00000590491 1708 ntBASIC19.44■□□□□ 0.7
ATP1B3P54709 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP1B3P54709 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP1B3P54709 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP1B3P54709 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP1B3P54709 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP1B3P54709 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP1B3P54709 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP1B3P54709 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATP1B3P54709 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATP1B3P54709 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP1B3P54709 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP1B3P54709 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATP1B3P54709 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP1B3P54709 LINC00565-201ENST00000562710 2331 ntBASIC19.42■□□□□ 0.7
ATP1B3P54709 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATP1B3P54709 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms