Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
NR4A2P43354 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
NR4A2P43354 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A2P43354 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NR4A2P43354 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A2P43354 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A2P43354 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.29■□□□□ 0.84
NR4A2P43354 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.29■□□□□ 0.84
NR4A2P43354 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A2P43354 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.29■□□□□ 0.84
NR4A2P43354 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.29■□□□□ 0.84
NR4A2P43354 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A2P43354 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A2P43354 AL137060.1-201ENST00000618151 2648 ntBASIC20.29■□□□□ 0.84
NR4A2P43354 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A2P43354 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.28■□□□□ 0.84
NR4A2P43354 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A2P43354 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A2P43354 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A2P43354 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A2P43354 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.28■□□□□ 0.84
NR4A2P43354 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NR4A2P43354 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NR4A2P43354 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.28■□□□□ 0.84
NR4A2P43354 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A2P43354 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NR4A2P43354 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A2P43354 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A2P43354 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.27■□□□□ 0.84
NR4A2P43354 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A2P43354 AC137767.1-201ENST00000602918 1920 ntBASIC20.27■□□□□ 0.84
NR4A2P43354 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A2P43354 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A2P43354 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A2P43354 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A2P43354 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NR4A2P43354 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.27■□□□□ 0.84
NR4A2P43354 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A2P43354 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.27■□□□□ 0.84
NR4A2P43354 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NR4A2P43354 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.27■□□□□ 0.83
NR4A2P43354 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NR4A2P43354 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NR4A2P43354 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
NR4A2P43354 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NR4A2P43354 GUSBP5-201ENST00000418136 578 ntBASIC20.26■□□□□ 0.83
NR4A2P43354 LONRF2P2-201ENST00000439212 571 ntBASIC20.26■□□□□ 0.83
NR4A2P43354 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A2P43354 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.26■□□□□ 0.83
NR4A2P43354 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NR4A2P43354 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A2P43354 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NR4A2P43354 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A2P43354 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A2P43354 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
NR4A2P43354 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NR4A2P43354 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.25■□□□□ 0.83
NR4A2P43354 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.25■□□□□ 0.83
NR4A2P43354 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.25■□□□□ 0.83
NR4A2P43354 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
NR4A2P43354 KRT18P10-201ENST00000388836 1287 ntBASIC20.25■□□□□ 0.83
NR4A2P43354 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NR4A2P43354 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A2P43354 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NR4A2P43354 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.24■□□□□ 0.83
NR4A2P43354 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A2P43354 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A2P43354 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A2P43354 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A2P43354 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.24■□□□□ 0.83
NR4A2P43354 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.24■□□□□ 0.83
NR4A2P43354 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.24■□□□□ 0.83
NR4A2P43354 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A2P43354 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NR4A2P43354 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.24■□□□□ 0.83
NR4A2P43354 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A2P43354 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A2P43354 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
NR4A2P43354 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NR4A2P43354 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NR4A2P43354 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.23■□□□□ 0.83
NR4A2P43354 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NR4A2P43354 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NR4A2P43354 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.23■□□□□ 0.83
NR4A2P43354 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.23■□□□□ 0.83
NR4A2P43354 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.23■□□□□ 0.83
NR4A2P43354 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NR4A2P43354 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NR4A2P43354 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A2P43354 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A2P43354 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A2P43354 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms