Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
HMGCLP35914 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCLP35914 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCLP35914 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.56■■□□□ 1.2
HMGCLP35914 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCLP35914 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.56■■□□□ 1.2
HMGCLP35914 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.56■■□□□ 1.2
HMGCLP35914 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.56■■□□□ 1.2
HMGCLP35914 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.56■■□□□ 1.2
HMGCLP35914 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.56■■□□□ 1.2
HMGCLP35914 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCLP35914 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCLP35914 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCLP35914 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
HMGCLP35914 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLP35914 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLP35914 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLP35914 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLP35914 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HMGCLP35914 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLP35914 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.55■■□□□ 1.2
HMGCLP35914 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.55■■□□□ 1.2
HMGCLP35914 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLP35914 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
HMGCLP35914 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HMGCLP35914 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLP35914 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HMGCLP35914 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLP35914 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLP35914 AC009102.2-201ENST00000606772 1639 ntBASIC22.54■■□□□ 1.2
HMGCLP35914 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLP35914 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLP35914 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
HMGCLP35914 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLP35914 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLP35914 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLP35914 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.54■■□□□ 1.2
HMGCLP35914 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLP35914 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCLP35914 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCLP35914 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.53■■□□□ 1.2
HMGCLP35914 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCLP35914 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCLP35914 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.53■■□□□ 1.2
HMGCLP35914 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.53■■□□□ 1.2
HMGCLP35914 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCLP35914 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.53■■□□□ 1.2
HMGCLP35914 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCLP35914 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCLP35914 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCLP35914 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCLP35914 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCLP35914 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.52■■□□□ 1.2
HMGCLP35914 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.52■■□□□ 1.2
HMGCLP35914 ANOS2P-203ENST00000472227 1816 ntBASIC22.52■■□□□ 1.2
HMGCLP35914 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCLP35914 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.52■■□□□ 1.19
HMGCLP35914 AC092068.2-201ENST00000590491 1708 ntBASIC22.51■■□□□ 1.19
HMGCLP35914 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCLP35914 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCLP35914 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCLP35914 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.51■■□□□ 1.19
HMGCLP35914 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCLP35914 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCLP35914 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.51■■□□□ 1.19
HMGCLP35914 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCLP35914 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCLP35914 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCLP35914 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
HMGCLP35914 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.49■■□□□ 1.19
HMGCLP35914 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.49■■□□□ 1.19
HMGCLP35914 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLP35914 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLP35914 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLP35914 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLP35914 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLP35914 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLP35914 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLP35914 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HMGCLP35914 C17orf82-201ENST00000623772 1530 ntBASIC22.48■■□□□ 1.19
HMGCLP35914 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLP35914 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.48■■□□□ 1.19
HMGCLP35914 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLP35914 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.48■■□□□ 1.19
HMGCLP35914 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.48■■□□□ 1.19
HMGCLP35914 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.48■■□□□ 1.19
HMGCLP35914 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.48■■□□□ 1.19
HMGCLP35914 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLP35914 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLP35914 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLP35914 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLP35914 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HMGCLP35914 AC079630.1-202ENST00000618127 1840 ntBASIC22.47■■□□□ 1.19
HMGCLP35914 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLP35914 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
HMGCLP35914 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLP35914 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLP35914 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.47■■□□□ 1.19
HMGCLP35914 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HMGCLP35914 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms