Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SNCGO76070 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
SNCGO76070 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.26■□□□□ 0.03
SNCGO76070 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNCGO76070 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SNCGO76070 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SNCGO76070 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.25■□□□□ 0.03
SNCGO76070 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 DENR-202ENST00000455982 1052 ntTSL 5 BASIC15.25■□□□□ 0.03
SNCGO76070 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC15.25■□□□□ 0.03
SNCGO76070 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNCGO76070 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNCGO76070 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SNCGO76070 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNCGO76070 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCGO76070 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 PKD1P1-201ENST00000458669 6805 ntBASIC15.24■□□□□ 0.03
SNCGO76070 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.24■□□□□ 0.03
SNCGO76070 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SNCGO76070 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SNCGO76070 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SNCGO76070 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SNCGO76070 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.24■□□□□ 0.03
SNCGO76070 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SNCGO76070 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNCGO76070 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SNCGO76070 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCGO76070 WHAMMP2-203ENST00000563942 1603 ntBASIC15.23■□□□□ 0.03
SNCGO76070 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SNCGO76070 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SNCGO76070 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCGO76070 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SNCGO76070 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCGO76070 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SNCGO76070 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCGO76070 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCGO76070 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SNCGO76070 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SNCGO76070 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.22■□□□□ 0.03
SNCGO76070 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC15.22■□□□□ 0.03
SNCGO76070 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC15.22■□□□□ 0.03
SNCGO76070 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
SNCGO76070 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNCGO76070 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SNCGO76070 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.22■□□□□ 0.03
SNCGO76070 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SNCGO76070 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNCGO76070 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SNCGO76070 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNCGO76070 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNCGO76070 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNCGO76070 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SNCGO76070 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNCGO76070 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SNCGO76070 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNCGO76070 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SNCGO76070 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNCGO76070 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms