Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.93■■■□□ 2.22
ABCC4O15439 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ABCC4O15439 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.93■■■□□ 2.22
ABCC4O15439 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
ABCC4O15439 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
ABCC4O15439 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
ABCC4O15439 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.93■■■□□ 2.22
ABCC4O15439 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.92■■■□□ 2.22
ABCC4O15439 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
ABCC4O15439 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
ABCC4O15439 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC28.92■■■□□ 2.22
ABCC4O15439 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCC4O15439 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCC4O15439 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.92■■■□□ 2.22
ABCC4O15439 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCC4O15439 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCC4O15439 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCC4O15439 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCC4O15439 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
ABCC4O15439 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ABCC4O15439 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.91■■■□□ 2.22
ABCC4O15439 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ABCC4O15439 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
ABCC4O15439 AC142381.2-201ENST00000566120 298 ntBASIC28.9■■■□□ 2.22
ABCC4O15439 AL136162.1-201ENST00000607711 1078 ntBASIC28.9■■■□□ 2.22
ABCC4O15439 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
ABCC4O15439 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
ABCC4O15439 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ABCC4O15439 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.89■■■□□ 2.22
ABCC4O15439 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.89■■■□□ 2.21
ABCC4O15439 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
ABCC4O15439 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.89■■■□□ 2.21
ABCC4O15439 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.88■■■□□ 2.21
ABCC4O15439 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.88■■■□□ 2.21
ABCC4O15439 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ABCC4O15439 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ABCC4O15439 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ABCC4O15439 SUDS3P1-201ENST00000505831 966 ntBASIC28.88■■■□□ 2.21
ABCC4O15439 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
ABCC4O15439 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ABCC4O15439 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ABCC4O15439 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.87■■■□□ 2.21
ABCC4O15439 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
ABCC4O15439 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ABCC4O15439 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.87■■■□□ 2.21
ABCC4O15439 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.87■■■□□ 2.21
ABCC4O15439 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
ABCC4O15439 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.86■■■□□ 2.21
ABCC4O15439 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ABCC4O15439 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ABCC4O15439 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ABCC4O15439 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.86■■■□□ 2.21
ABCC4O15439 SRD5A1P1-201ENST00000442297 786 ntBASIC28.86■■■□□ 2.21
ABCC4O15439 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ABCC4O15439 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ABCC4O15439 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.86■■■□□ 2.21
ABCC4O15439 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ABCC4O15439 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.86■■■□□ 2.21
ABCC4O15439 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.86■■■□□ 2.21
ABCC4O15439 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ABCC4O15439 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ABCC4O15439 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
ABCC4O15439 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
ABCC4O15439 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.85■■■□□ 2.21
ABCC4O15439 AC135279.3-201ENST00000610945 1311 ntBASIC28.85■■■□□ 2.21
ABCC4O15439 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.85■■■□□ 2.21
ABCC4O15439 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ABCC4O15439 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.84■■■□□ 2.21
ABCC4O15439 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ABCC4O15439 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ABCC4O15439 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ABCC4O15439 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.84■■■□□ 2.21
ABCC4O15439 AC024257.2-201ENST00000549699 147 ntBASIC28.84■■■□□ 2.21
ABCC4O15439 RARRES2P6-201ENST00000567333 442 ntBASIC28.84■■■□□ 2.21
ABCC4O15439 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
ABCC4O15439 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ABCC4O15439 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ABCC4O15439 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.84■■■□□ 2.21
ABCC4O15439 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
ABCC4O15439 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.83■■■□□ 2.21
ABCC4O15439 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ABCC4O15439 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.83■■■□□ 2.21
ABCC4O15439 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.83■■■□□ 2.21
ABCC4O15439 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.83■■■□□ 2.21
ABCC4O15439 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
ABCC4O15439 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.82■■■□□ 2.2
ABCC4O15439 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.82■■■□□ 2.2
ABCC4O15439 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
ABCC4O15439 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
ABCC4O15439 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCC4O15439 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCC4O15439 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
ABCC4O15439 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCC4O15439 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCC4O15439 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCC4O15439 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCC4O15439 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.81■■■□□ 2.2
ABCC4O15439 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCC4O15439 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
ABCC4O15439 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms