Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV30A0A087WSZ9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 MIR4281-201ENST00000580852 62 ntBASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV30A0A087WSZ9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV30A0A087WSZ9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV30A0A087WSZ9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV30A0A087WSZ9 DUSP8P3-201ENST00000399571 1760 ntBASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 AC012354.3-201ENST00000623734 483 ntBASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV30A0A087WSZ9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 MIR4508-201ENST00000584178 70 ntBASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 AC010980.1-201ENST00000587192 1142 ntBASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 AF131216.4-201ENST00000638924 1588 ntBASIC17.62■□□□□ 0.41
TRAV30A0A087WSZ9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 PKD1P6-201ENST00000343738 4769 ntBASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 AC004448.1-201ENST00000458332 883 ntBASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 PVT1_1.1-201ENST00000615125 194 ntBASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms