Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 PXK-210ENST00000479241 2817 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CCT8L1P-201ENST00000465400 1674 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC027601.5-201ENST00000624065 2482 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AL390755.1-201ENST00000623716 2027 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC026316.1-201ENST00000398900 414 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 RN7SKP199-201ENST00000410325 305 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 RPSAP31-201ENST00000416648 895 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC012362.1-201ENST00000434906 739 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC098935.1-201ENST00000446057 611 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 FTH1P22-201ENST00000456305 520 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 RN7SL530P-201ENST00000485097 298 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms