Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CGNL1Q0VF96 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SAT1-201ENST00000379251 801 ntTSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SAT1-202ENST00000379253 909 ntTSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SAT1-203ENST00000379254 868 ntTSL 3 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 AC152010.1-201ENST00000415779 2006 ntBASIC19.3■□□□□ 0.68
CGNL1Q0VF96 GUSBP10-201ENST00000417412 665 ntBASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 AC018638.5-201ENST00000450885 754 ntBASIC19.3■□□□□ 0.68
CGNL1Q0VF96 AC095040.1-201ENST00000513286 675 ntBASIC19.3■□□□□ 0.68
CGNL1Q0VF96 CTBP2P4-201ENST00000513884 920 ntBASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 KLF17P1-201ENST00000547105 1126 ntBASIC19.3■□□□□ 0.68
CGNL1Q0VF96 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 MIR2392-201ENST00000584881 84 ntBASIC19.3■□□□□ 0.68
CGNL1Q0VF96 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 CICP16-201ENST00000502609 2813 ntBASIC19.3■□□□□ 0.68
CGNL1Q0VF96 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CGNL1Q0VF96 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 AL627389.1-201ENST00000413508 1182 ntBASIC19.29■□□□□ 0.68
CGNL1Q0VF96 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 AC079112.1-201ENST00000454972 939 ntBASIC19.29■□□□□ 0.68
CGNL1Q0VF96 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 AC016397.2-201ENST00000624848 1985 ntBASIC19.29■□□□□ 0.68
CGNL1Q0VF96 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.29■□□□□ 0.68
CGNL1Q0VF96 TCAM1P-207ENST00000485295 1537 ntBASIC19.28■□□□□ 0.68
CGNL1Q0VF96 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CGNL1Q0VF96 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CGNL1Q0VF96 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.28■□□□□ 0.68
CGNL1Q0VF96 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.28■□□□□ 0.68
CGNL1Q0VF96 RPL18AP3-201ENST00000462885 528 ntBASIC19.28■□□□□ 0.68
CGNL1Q0VF96 SLC25A15P3-201ENST00000505530 290 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms