Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
RPL39P62891 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 AL590440.2-201ENST00000641973 1595 ntBASIC10.19□□□□□ -0.78
RPL39P62891 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10.19□□□□□ -0.78
RPL39P62891 AC134915.1-201ENST00000426461 574 ntBASIC10.19□□□□□ -0.78
RPL39P62891 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 HLA-J-203ENST00000494367 1087 ntBASIC10.19□□□□□ -0.78
RPL39P62891 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.19□□□□□ -0.78
RPL39P62891 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.19□□□□□ -0.78
RPL39P62891 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 AC140878.1-201ENST00000565277 250 ntBASIC10.19□□□□□ -0.78
RPL39P62891 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC10.19□□□□□ -0.78
RPL39P62891 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
RPL39P62891 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.19□□□□□ -0.78
RPL39P62891 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.19□□□□□ -0.78
RPL39P62891 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.19□□□□□ -0.78
RPL39P62891 AL390955.2-201ENST00000603032 514 ntBASIC10.19□□□□□ -0.78
RPL39P62891 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 PTPRVP-205ENST00000641549 5067 ntBASIC10.19□□□□□ -0.78
RPL39P62891 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.19□□□□□ -0.78
RPL39P62891 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 CSPG4P11-201ENST00000560634 4910 ntBASIC10.19□□□□□ -0.78
RPL39P62891 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.19□□□□□ -0.78
RPL39P62891 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RPL39P62891 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
RPL39P62891 AC009474.1-201ENST00000455096 1565 ntBASIC10.18□□□□□ -0.78
RPL39P62891 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
RPL39P62891 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
RPL39P62891 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 VENTXP1-201ENST00000569334 2716 ntBASIC10.18□□□□□ -0.78
RPL39P62891 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.18□□□□□ -0.78
RPL39P62891 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.18□□□□□ -0.78
RPL39P62891 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.18□□□□□ -0.78
RPL39P62891 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 C1QBPP1-201ENST00000400117 770 ntBASIC10.18□□□□□ -0.78
RPL39P62891 AC254562.1-201ENST00000417586 456 ntBASIC10.18□□□□□ -0.78
RPL39P62891 TREML5P-201ENST00000421694 576 ntBASIC10.18□□□□□ -0.78
RPL39P62891 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 AC136604.1-202ENST00000425471 771 ntBASIC10.18□□□□□ -0.78
RPL39P62891 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms