Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC6A9P48067 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SLC6A9P48067 AC089987.1-201ENST00000551654 2209 ntBASIC12.8□□□□□ -0.36
SLC6A9P48067 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SLC6A9P48067 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC6A9P48067 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC6A9P48067 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 KRT8P4-201ENST00000509735 1454 ntBASIC12.79□□□□□ -0.36
SLC6A9P48067 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 AL590440.2-201ENST00000641973 1595 ntBASIC12.79□□□□□ -0.36
SLC6A9P48067 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 MIR1202-201ENST00000408529 83 ntBASIC12.79□□□□□ -0.36
SLC6A9P48067 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.79□□□□□ -0.36
SLC6A9P48067 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.79□□□□□ -0.36
SLC6A9P48067 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.79□□□□□ -0.36
SLC6A9P48067 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.79□□□□□ -0.36
SLC6A9P48067 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.79□□□□□ -0.36
SLC6A9P48067 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 AC133552.6-201ENST00000613406 534 ntBASIC12.79□□□□□ -0.36
SLC6A9P48067 COX11-210ENST00000639671 696 ntBASIC12.79□□□□□ -0.36
SLC6A9P48067 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SLC6A9P48067 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
SLC6A9P48067 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC6A9P48067 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC6A9P48067 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
SLC6A9P48067 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SLC6A9P48067 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC6A9P48067 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 PDIA3P1-201ENST00000471856 1510 ntBASIC12.78□□□□□ -0.36
SLC6A9P48067 TCAM1P-207ENST00000485295 1537 ntBASIC12.78□□□□□ -0.36
SLC6A9P48067 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC6A9P48067 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SLC6A9P48067 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC6A9P48067 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC6A9P48067 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SLC6A9P48067 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC6A9P48067 AL356585.2-201ENST00000625078 2396 ntBASIC12.78□□□□□ -0.36
SLC6A9P48067 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC6A9P48067 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC6A9P48067 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC6A9P48067 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC6A9P48067 AL136309.1-201ENST00000403917 691 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms