Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 RN7SKP230-201ENST00000365642 335 ntBASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 GIMAP3P-201ENST00000495150 836 ntBASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 AC069262.1-201ENST00000539058 672 ntBASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 AL589987.1-201ENST00000453380 819 ntBASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 SPDYE22P-201ENST00000582158 798 ntBASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 AC004466.1-201ENST00000599515 1080 ntBASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 LRRC59-203ENST00000576448 1531 ntBASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms