Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 AC092810.2-201ENST00000431570 362 ntBASIC19.13■□□□□ 0.65
PHF8Q9UPP1 RPSAP12-201ENST00000435879 888 ntBASIC19.13■□□□□ 0.65
PHF8Q9UPP1 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 SOD2-205ENST00000444946 917 ntTSL 2 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 HNRNPA1P42-201ENST00000458678 957 ntBASIC19.13■□□□□ 0.65
PHF8Q9UPP1 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 ANKRD26P1-203ENST00000569528 966 ntBASIC19.13■□□□□ 0.65
PHF8Q9UPP1 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 U3.5-201ENST00000363448 216 ntBASIC19.12■□□□□ 0.65
PHF8Q9UPP1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 HLA-DMA-202ENST00000395303 1007 ntBASIC19.12■□□□□ 0.65
PHF8Q9UPP1 KRT8P30-201ENST00000432100 650 ntBASIC19.12■□□□□ 0.65
PHF8Q9UPP1 AC004801.1-201ENST00000549557 360 ntBASIC19.12■□□□□ 0.65
PHF8Q9UPP1 AC079414.2-201ENST00000567157 1104 ntBASIC19.12■□□□□ 0.65
PHF8Q9UPP1 AC006116.2-201ENST00000589958 988 ntBASIC19.12■□□□□ 0.65
PHF8Q9UPP1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF8Q9UPP1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 HPD-204ENST00000543163 1709 ntTSL 5 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 WASH7P-201ENST00000488147 1351 ntBASIC19.11■□□□□ 0.65
PHF8Q9UPP1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 AC103563.1-201ENST00000429316 123 ntBASIC19.11■□□□□ 0.65
PHF8Q9UPP1 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 AC113347.2-201ENST00000512350 279 ntBASIC19.11■□□□□ 0.65
PHF8Q9UPP1 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 SRP14-208ENST00000560773 468 ntTSL 3 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 MIR4254-201ENST00000581063 76 ntBASIC19.11■□□□□ 0.65
PHF8Q9UPP1 AL591424.3-201ENST00000614278 872 ntBASIC19.11■□□□□ 0.65
PHF8Q9UPP1 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC19.11■□□□□ 0.65
PHF8Q9UPP1 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF8Q9UPP1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PHF8Q9UPP1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms