Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 MIR1301-201ENST00000408518 82 ntBASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 ALG1L3P-201ENST00000503331 765 ntBASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 AL109809.1-201ENST00000418979 1367 ntBASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRMT13Q9NUP7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AL365181.1-201ENST00000564032 1828 ntBASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AP000354.1-201ENST00000396982 456 ntBASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 RPL3P2-204ENST00000413027 1203 ntBASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AC100858.1-201ENST00000514059 1228 ntBASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AL512310.5-201ENST00000551999 515 ntBASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 AL365209.1-201ENST00000624418 6473 ntBASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRMT13Q9NUP7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
TRMT13Q9NUP7 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms