Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
FAM60AQ9NP50 SHMT1P1-201ENST00000419974 1312 ntBASIC13.57□□□□□ -0.24
FAM60AQ9NP50 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.57□□□□□ -0.24
FAM60AQ9NP50 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FAM60AQ9NP50 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FAM60AQ9NP50 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.57□□□□□ -0.24
FAM60AQ9NP50 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FAM60AQ9NP50 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FAM60AQ9NP50 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 RPL13AP3-202ENST00000494676 1473 ntBASIC13.56□□□□□ -0.24
FAM60AQ9NP50 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 NOC2LP1-201ENST00000450578 752 ntBASIC13.56□□□□□ -0.24
FAM60AQ9NP50 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AC095040.1-201ENST00000513286 675 ntBASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AC073352.2-201ENST00000609385 439 ntBASIC13.56□□□□□ -0.24
FAM60AQ9NP50 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AC074138.1-201ENST00000611182 1303 ntBASIC13.56□□□□□ -0.24
FAM60AQ9NP50 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 HSPA7-201ENST00000445535 1927 ntBASIC13.56□□□□□ -0.24
FAM60AQ9NP50 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 MST1P2-201ENST00000457982 2291 ntBASIC13.56□□□□□ -0.24
FAM60AQ9NP50 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.56□□□□□ -0.24
FAM60AQ9NP50 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 BX679664.3-201ENST00000414070 555 ntBASIC13.55□□□□□ -0.24
FAM60AQ9NP50 HMGA1P1-201ENST00000415560 1062 ntBASIC13.55□□□□□ -0.24
FAM60AQ9NP50 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 AC113935.1-201ENST00000471722 555 ntBASIC13.55□□□□□ -0.24
FAM60AQ9NP50 CHCHD2P2-201ENST00000503744 321 ntBASIC13.55□□□□□ -0.24
FAM60AQ9NP50 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.55□□□□□ -0.24
FAM60AQ9NP50 MIR3147-201ENST00000577811 66 ntBASIC13.55□□□□□ -0.24
FAM60AQ9NP50 RN7SL455P-201ENST00000580629 282 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 343.3 ms