Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HDHD3Q9BSH5 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HDHD3Q9BSH5 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.18□□□□□ -0.46
HDHD3Q9BSH5 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 FAM207CP-201ENST00000443486 507 ntBASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 AC006538.3-201ENST00000612495 578 ntBASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HDHD3Q9BSH5 PCDHA5-203ENST00000614258 4248 ntBASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 AC002472.2-201ENST00000442739 958 ntBASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 AP001889.1-201ENST00000525414 633 ntBASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 AC025279.2-201ENST00000569730 653 ntBASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms