Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 AL138709.1-201ENST00000614840 1693 ntBASIC13.18□□□□□ -0.3
SNX18Q96RF0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 AC022210.1-201ENST00000449856 793 ntBASIC13.18□□□□□ -0.3
SNX18Q96RF0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 AC145423.3-201ENST00000615987 467 ntBASIC13.18□□□□□ -0.3
SNX18Q96RF0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 BX324167.2-201ENST00000623717 3316 ntBASIC13.18□□□□□ -0.3
SNX18Q96RF0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SNX18Q96RF0 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNX18Q96RF0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 FKBP4P6-201ENST00000457486 1332 ntBASIC13.17□□□□□ -0.3
SNX18Q96RF0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 VENTXP1-201ENST00000569334 2716 ntBASIC13.17□□□□□ -0.3
SNX18Q96RF0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 RN7SKP175-201ENST00000408472 289 ntBASIC13.17□□□□□ -0.3
SNX18Q96RF0 KRT43P-201ENST00000434019 910 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms