Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH4P55283 AL009178.2-201ENST00000597278 2719 ntBASIC14.63□□□□□ -0.07
CDH4P55283 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH4P55283 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH4P55283 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
CDH4P55283 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH4P55283 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH4P55283 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH4P55283 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CDH4P55283 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH4P55283 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.62□□□□□ -0.07
CDH4P55283 AC234782.1-201ENST00000451950 919 ntBASIC14.62□□□□□ -0.07
CDH4P55283 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 GOLGA2P8-201ENST00000505201 779 ntBASIC14.62□□□□□ -0.07
CDH4P55283 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 ALG1L13P-202ENST00000519320 584 ntBASIC14.62□□□□□ -0.07
CDH4P55283 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 MIR3677-201ENST00000578964 60 ntBASIC14.62□□□□□ -0.07
CDH4P55283 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH4P55283 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH4P55283 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH4P55283 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH4P55283 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH4P55283 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.61□□□□□ -0.07
CDH4P55283 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 AC006987.1-201ENST00000413610 527 ntBASIC14.61□□□□□ -0.07
CDH4P55283 AC073869.2-201ENST00000417338 1026 ntBASIC14.61□□□□□ -0.07
CDH4P55283 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH4P55283 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 CEP164P1-201ENST00000455142 418 ntBASIC14.61□□□□□ -0.07
CDH4P55283 AP000358.1-201ENST00000456260 156 ntBASIC14.61□□□□□ -0.07
CDH4P55283 CHCHD2P2-201ENST00000503744 321 ntBASIC14.61□□□□□ -0.07
CDH4P55283 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.61□□□□□ -0.07
CDH4P55283 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 KRT8P19-201ENST00000551916 1455 ntBASIC14.61□□□□□ -0.07
CDH4P55283 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDH4P55283 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 AC090643.2-201ENST00000623442 2029 ntBASIC14.61□□□□□ -0.07
CDH4P55283 AC026748.1-201ENST00000624349 3251 ntBASIC14.61□□□□□ -0.07
CDH4P55283 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH4P55283 MARK2P16-201ENST00000605714 1723 ntBASIC14.61□□□□□ -0.07
CDH4P55283 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH4P55283 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms