Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.48□□□□□ -0.09
RETP07949 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.48□□□□□ -0.09
RETP07949 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.48□□□□□ -0.09
RETP07949 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RETP07949 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.48□□□□□ -0.09
RETP07949 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RETP07949 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RETP07949 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.47□□□□□ -0.09
RETP07949 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RETP07949 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RETP07949 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 GUSBP10-201ENST00000417412 665 ntBASIC14.47□□□□□ -0.09
RETP07949 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.47□□□□□ -0.09
RETP07949 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.47□□□□□ -0.09
RETP07949 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.47□□□□□ -0.09
RETP07949 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.47□□□□□ -0.09
RETP07949 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.47□□□□□ -0.09
RETP07949 RN7SL530P-201ENST00000485097 298 ntBASIC14.47□□□□□ -0.09
RETP07949 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.47□□□□□ -0.09
RETP07949 HERC2P11-201ENST00000562845 725 ntBASIC14.47□□□□□ -0.09
RETP07949 AC100756.2-201ENST00000569537 736 ntBASIC14.47□□□□□ -0.09
RETP07949 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
RETP07949 PEBP1P2-201ENST00000603980 558 ntBASIC14.47□□□□□ -0.09
RETP07949 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.47□□□□□ -0.09
RETP07949 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
RETP07949 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RETP07949 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.47□□□□□ -0.09
RETP07949 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RETP07949 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RETP07949 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RETP07949 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.47□□□□□ -0.09
RETP07949 AC005840.4-201ENST00000541242 2494 ntBASIC14.47□□□□□ -0.09
RETP07949 REXO1L4P-201ENST00000605109 1937 ntBASIC14.47□□□□□ -0.09
RETP07949 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.46□□□□□ -0.09
RETP07949 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.46□□□□□ -0.09
RETP07949 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 AC097359.2-201ENST00000604992 2389 ntBASIC14.46□□□□□ -0.09
RETP07949 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.46□□□□□ -0.09
RETP07949 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
RETP07949 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.46□□□□□ -0.09
RETP07949 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.46□□□□□ -0.09
RETP07949 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
RETP07949 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.46□□□□□ -0.09
RETP07949 ACTBP7-201ENST00000418351 1124 ntBASIC14.46□□□□□ -0.09
RETP07949 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.46□□□□□ -0.09
RETP07949 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.46□□□□□ -0.09
RETP07949 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.46□□□□□ -0.09
RETP07949 AC093909.3-201ENST00000504783 336 ntBASIC14.46□□□□□ -0.09
RETP07949 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.46□□□□□ -0.09
RETP07949 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.46□□□□□ -0.09
RETP07949 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RETP07949 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
RETP07949 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms